Candidatus Nitrosopumilus koreensis: NKOR_06395
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Entry
NKOR_06395 CDS
T02304
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATPase
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NKOR_06395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nkr02000
]
NKOR_06395
Transporters [BR:
nkr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NKOR_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
PRK
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFS81158
UniProt:
K0B4Q2
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All DBs
Position
complement(1063776..1064711)
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AA seq
311 aa
AA seq
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MAFLTVDGLTSRYDSSKCPVYAVDDVDFTLEDGESIGIAGESACGKSTLGLSIIRMLVGG
KTQGKIIFDGDSILDVDETKFDNAFRWKKISMVFQGAMNSLDPVFTINEQFLEILKQHHF
DGDSKQIISDAMNSVNLDENVLKKYPHELSGGMKQRVVIAMALLLKPKFVIADEPTTALD
VLIQAQIINLLKSLKKSGMSFMLITHDLAVLSEIAEKIGIMYGGQMVEFGSSEEIYKNPK
HPYTQGLLESIPTLKGDKPKYIKGIPPSLLDAPTQCRFIDRCPLAVEKCKQLPPKFKTET
GYVRCWLYEDQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcatttctaactgttgatggattaacatcacgatatgattcatcaaaatgtccagtt
tatgccgtagatgatgttgactttacattagaagatggagaatccataggaattgcaggt
gagagtgcatgtgggaaaagtactttgggattgtctattattcgaatgcttgttggagga
aaaacacaaggtaagataatttttgatggtgattctatcttagatgttgatgaaactaaa
tttgataatgcatttcgatggaaaaaaatctctatggtatttcaaggagcaatgaactca
cttgatcctgtttttaccatcaatgaacaatttcttgaaattttaaaacagcatcatttt
gatggtgactcaaaacagataatttctgatgcaatgaattctgtaaaccttgatgaaaat
gtactgaaaaaatatcctcatgagcttagtggtggtatgaagcaaagagttgtaattgcc
atggctttgctgctaaaaccaaaatttgtgattgcagatgagcctaccactgcacttgat
gtattaatccaagctcaaatcatcaatcttttaaaatctctaaagaaatcgggcatgtcc
tttatgctaattacgcacgatttggccgtactgtctgagattgcagagaagattggcatc
atgtatggtggacaaatggtagaatttggttcctctgaagaaatttacaaaaatccaaaa
catccatacactcaaggacttttagaatcgattccaacactaaagggagacaaaccaaaa
tacatcaaaggcattcctccaagcttacttgatgcgccaacacaatgtagatttattgac
aggtgtcctttggcagttgaaaaatgtaagcaacttccgcctaaatttaaaactgaaact
ggatatgttagatgctggttatatgaagatcaataa
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