Candidatus Nitrosopumilus koreensis: NKOR_06530
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Entry
NKOR_06530 CDS
T02304
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03410
Base excision repair
nkr03430
Mismatch repair
nkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKOR_06530
03430 Mismatch repair
NKOR_06530
03440 Homologous recombination
NKOR_06530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkr03400
]
NKOR_06530
DNA repair and recombination proteins [BR:
nkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NKOR_06530
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NKOR_06530
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NKOR_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AFS81185
UniProt:
K0B891
LinkDB
All DBs
Position
complement(1086793..1087635)
Genome browser
AA seq
280 aa
AA seq
DB search
MEALQQVVNDEKLKSLYICDLGLSKKTQDEFIDIMKSLRKNKVSITYIDHHDIDPDVVKS
LQKIKVKVIHDINECTTVQVYNAFKSKLNEHATFVATCAAITDYMEDRPLGAKLLQMYDR
QFALISATVLTYNIVGHQKEPDYLLYLVEELAESKFPHDIPNTFEFAQIQVEKLSQMIAK
VKAGMKTMKNLGYMEITDAGASGAVNFVMGLSGKDVGVAYKERVDHGIYAVSVRGSKNCK
VHLGKIVNVLATDLGGSGGGHDKACGAVIPKPKIKNSLQN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaagcattacaacaagtagttaacgatgaaaaactaaaatcattatacatttgtgat
ttgggtctaagtaaaaagactcaagatgaatttattgatattatgaaatctttgagaaaa
aataaggtctccattacctatattgatcatcatgatattgatcctgatgttgtaaaatcg
ctacaaaaaatcaaagtcaaagtgatccatgacataaatgaatgtactactgttcaagtt
tacaatgcctttaaatcaaaattaaatgaacatgcaacttttgttgcaacatgtgctgcc
attactgattatatggaagatagaccattgggtgcaaaattacttcaaatgtatgacaga
caatttgcactcatcagtgctactgttttaacctacaatattgtaggtcatcaaaaggaa
cctgattatctattatacttggtagaggaattagccgaatctaaattccctcatgatatt
cccaacacctttgagtttgcacaaattcaagtcgagaaactttctcaaatgattgccaaa
gtaaaagcaggtatgaaaaccatgaaaaatcttggatacatggagattactgatgctggt
gctagtggtgctgtgaattttgtaatgggcttatctggcaaagatgtaggtgttgcatac
aaagaaagagttgatcatggaatctatgcagtttcagttcgtggttctaaaaattgtaaa
gttcatttgggaaaaattgttaatgtgttagctaccgatcttggcggctctggtggtgga
catgataaagcatgtggtgcagtgataccaaaaccaaaaataaaaaattcgttacagaat
taa
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