Candidatus Nitrosopumilus koreensis: NKOR_08375
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Entry
NKOR_08375 CDS
T02304
Name
(GenBank) HhH-GPD family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKOR_08375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nkr03400
]
NKOR_08375
Enzymes [BR:
nkr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NKOR_08375
DNA repair and recombination proteins [BR:
nkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NKOR_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RNA_helicase
ILEI
DUF512
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFS81534
UniProt:
K0B7Q1
LinkDB
All DBs
Position
1392858..1393721
Genome browser
AA seq
287 aa
AA seq
DB search
MKKLLYDMQVKQPIDVENSINSGQVFLWKKNDKYWYGINGQDVLQVDEYGKIKSLKNYKT
DFFRNKDNFDKIIKSISKDKIVKNAVKKYPGLRITKQDPFQCIISFIISSNSNIQKIKNN
LENISKRFGERIEYKDQEFFLFPNARILSKASINEIKKCGVGYRAEFIKEAAKIISSEKF
KIENLKTDSYSDAKKKMCIIPGIGNKVADCILLFSLDKLEAFPLDRWMIRILEKYYSKKF
QLNTKTITEKQYEILHKKIVDYFGPYAGYAQQFLFKMERENYRKKWL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattactgtatgatatgcaagtcaaacaaccaatagatgtagaaaattcaata
aatagcggccaagtttttctttggaaaaaaaatgacaagtattggtatgggatcaatggt
caagatgttcttcaggtagacgaatatggaaaaataaaatctcttaaaaattataaaaca
gatttttttagaaataaagataattttgataaaataataaagtccatttcaaaagataaa
atagtaaaaaatgctgtaaaaaaatatccaggattaagaatcacaaaacaagatcctttt
caatgcataatttcatttattatatcatctaattcaaacatccaaaaaattaaaaataat
ttagaaaatatatcaaagagatttggggaaagaatagaatacaaagatcaggaatttttt
ttatttcctaatgcaagaatactttccaaagcatcaataaatgaaattaaaaagtgtggt
gtaggataccgtgcagaattcataaaagaagctgcaaaaattatatcctctgaaaaattc
aaaattgaaaacctaaaaacagacagttattctgatgcaaaaaagaaaatgtgtatcatt
ccaggcataggaaacaaggtagcagattgtattttgttattttctcttgacaaattagaa
gcatttccattagatagatggatgattagaattttagaaaaatattattcaaaaaaattt
caattgaacacaaagacaattacagaaaaacaatatgaaattctacataaaaaaattgta
gattattttggcccatatgcaggatatgctcaacaatttctcttcaaaatggaaagagaa
aactacagaaaaaagtggctgtaa
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