Candidatus Nitrosopumilus koreensis: NKOR_09330
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Entry
NKOR_09330 CDS
T02304
Name
(GenBank) transcription termination factor Tfs
KO
K03057
transcription factor S
Organism
nkr
Candidatus Nitrosopumilus koreensis
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nkr03021
]
NKOR_09330
Transcription machinery [BR:
nkr03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
NKOR_09330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
DUF7351
DZR
Cas12f1-like_TNB
Zn_ribbon_Elf1
Zn_ribbon_TiaS
C1_1
CapR
Baculo_LEF5_C
tRNA-synt_1f
zf-C2H2_ZN142
IBR_1
RYYR-CCHC
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AFS81715
UniProt:
K0B9Q3
LinkDB
All DBs
Position
complement(1555478..1555792)
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AA seq
104 aa
AA seq
DB search
MKFCPKCEVKLKKGTSGLQCSKCGYTEGQEEKQAKKIIENEQEESILAFEGNEGEESHPT
IKIECEKCGHDEAVWWMLQTRSADEPTTQFYRCTKCKNTWRNYA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattttgccccaaatgtgaggttaaattaaaaaaaggtacctctggccttcaatgc
tcaaaatgtggttatacagaaggacaagaagaaaagcaggccaaaaaaattattgaaaac
gaacaagaagaatccattttggcttttgaaggaaatgagggagaagaatctcatccaacc
atcaaaattgaatgtgaaaaatgtggacatgatgaagcagtttggtggatgcttcaaaca
agaagtgcagatgaaccaacaacacaattttatcgctgtacaaaatgtaagaatacttgg
cgtaattacgcataa
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