Candidatus Nitrosopumilus koreensis: NKOR_09540
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Entry
NKOR_09540 CDS
T02304
Name
(GenBank) DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKOR_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nkr03032
]
NKOR_09540
Enzymes [BR:
nkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKOR_09540
DNA replication proteins [BR:
nkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
NKOR_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2_cat
PolC_DP2_central
PolC_DP2_N
zf-DPOE
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
AFS81757
UniProt:
K0B9I2
LinkDB
All DBs
Position
complement(1590089..1593466)
Genome browser
AA seq
1125 aa
AA seq
DB search
MSENDAISRISGIKMPDYYLDYYSNLSTETYSIFEAAASAKSSLVDSSGIIEPKIAFDLA
DRVAKMHEIDIAEPLRELLKINGKELSALILSKEIAQGKYSLPDSTLEEKLDLAVRVGLA
IVTEGVTIAPLQGISEVKIKKNKDGSEYLSVSIAGPMRSAGGTESAVTMLIADHVRKTAG
LAKFQANSFDDETGRFVEELRIYEREASSFQFHILDEDIEHVISNLPVELDGVDTDPYEV
VNHKSMARIKTDRVRGGALRVLNDGLIGRSKKLLKRIEMYNLDGWEWLNDLKGAVQTGEK
QEDAATKRMHEVITGRSVLSMPNKLGGFRLRYGRACNTGFAAVGIHPVIAEILDHTIAVG
TQIKIDTPGKGSTVAFVDSIDTPVVRLKNGNVVKIRDTKHGIEIKNDIEKILHLGDILIS
FGDFLENNAQLIPSGYVEEFWIEELKQKLQKYEPKDQYLTQFLNKIPTIDEALKISIDFD
MALHPHYLYFWDKISSEELNLLLQPEKINETSIEYSIQVKKILETLGVPHIVENDNILLE
NLEAKIFFNLLFREQIKINDSSVPQLISKSSGIKIRNKFSTSIGVRIGRPEKAAPRQMKP
PTHVLFPISDKGGPTRDLLKASRNEHFFTNIYNRHCTQCNQPSIGIKCSKCGTKTTVSYR
CPYCRDTLEEPFCDKCKRTALAYSHKEFPLKSKLLEAQEKIRLRAQEPFKGVKELISQDK
IAEPLEKGLARQNFGLTVFKDGTVRFDATNSPLTQFKPSWIGTSIEKLKELGYTHDIDGN
PLENPEQIVELRMQDVVIPYESGRYLVSICKYIDTLLEKFYGKTPFYNVHNSKELIGHLV
IGLAPHTSVGIVGRIIGYSETHVCFATPNWHSAKRRDADGDADSIMLLMDSLLNFSRQFL
SDAIGGLMDAPLLVQPLVLPHESQPQAHNLEVTKSFPLEFFESTIQQVKAPDISSVEIIK
SRLETERQFYDYYFTHSTSSLTTSKSRSAYSTLGSMLDKFDMQVKNAELIDAVNTSEIVS
DVISTHLVPDIMGNLRAYARQNFRCTGCGKSYRRMPLIQTCVCGHKLIPTITRGSVEKYL
KLAKRLVDKYDVSEYQRGRIHALADEIELVFGKSPGDQSLLTDYA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacgatgcaatttctcgtattagtggcatcaaaatgcctgattactatctt
gattattactcaaacttgtccacagaaacatattctatttttgaagctgcagcatctgca
aaatccagtttggttgattcctcaggcataattgagccgaaaatcgcatttgatcttgct
gatcgtgtagcaaaaatgcatgagattgatattgctgaacctctaagagaactcttaaaa
atcaatggaaaagaactttctgcactaattctatcaaaagagattgcacaaggaaaatac
tctctacctgattcgactttggaagaaaaacttgacttggcggttcgtgtcggattggca
atcgtcactgaaggagttaccattgctcctttacaaggaatcagtgaagttaagataaag
aaaaacaaagacggctctgaatatctttcagtctctattgcaggccctatgcgttcagca
ggaggaacagaatcagccgttacgatgttgatagctgatcatgttagaaagacagccgga
ttagcaaagtttcaagccaattcttttgatgatgaaacaggcaggtttgtcgaggaatta
agaatctatgaaagagaggcaagtagttttcaattccatatactggatgaagatattgaa
catgtgatttcaaatctacctgtagaactagatggtgtagacacagatccttatgaggtt
gtaaaccacaaatctatggcacgaataaaaactgatagagtacgaggaggtgccttacgt
gttctaaatgacggtcttattggaagatccaaaaaactactcaaaagaattgaaatgtac
aatcttgatggctgggaatggctcaatgatctaaaaggtgctgttcaaactggtgaaaaa
caagaagacgcagccacaaaaaggatgcatgaggtaattacaggaagatcagtcttgtca
atgcctaacaaactaggcggattccgattaagatatggaagagcatgtaatactggtttt
gcagcagtcggaattcatcctgtaattgcagagatacttgatcatacaattgcagtcgga
actcaaattaaaattgatactccaggaaaaggttctactgttgcatttgttgattcaatt
gatactcctgtggttcgtctgaaaaatggaaatgttgtgaagattagagatacaaaacat
ggaatagaaattaaaaatgacattgaaaaaatacttcatcttggagatattctaatatcg
tttggagatttcctagaaaataatgctcaacttatcccatcaggatatgtagaagaattc
tggatagaagagctaaaacaaaaactccaaaaatatgaacctaaggatcaatatctgacc
caatttctcaataaaataccaaccatagatgaagcattaaaaatctccattgattttgat
atggctcttcacccacactatctgtatttttgggataaaatatcctccgaagaactcaac
ctacttttacaacctgaaaaaatcaatgaaacctcaattgaatattctatacaagtaaaa
aaaatccttgaaacattaggagttccacatatagttgaaaatgataacatcctccttgaa
aaccttgaagcaaaaattttctttaatttattatttcgagagcaaattaaaatcaatgat
tcatccgttcctcaattaatttcaaaatcctctggaattaaaattagaaacaagttttct
acatctattggggttaggattggaagaccagaaaaggctgcacctagacagatgaaaccg
ccaacacatgtgttgtttcctataagtgacaaaggtgggcctacacgggatctgttaaag
gcatctagaaatgaacactttttcactaacatttacaatcgacattgtacacaatgtaac
caaccatcaattggaataaaatgctcaaaatgtggtacaaaaactaccgtttcttatagg
tgtccttattgtagagatacacttgaagaacctttttgtgataaatgcaaacgaaccgct
ttagcgtattcacataaagaatttccattaaaatcaaaactccttgaagctcaagaaaaa
atccgtttacgtgcacaagaaccattcaagggagtaaaggaattaatcagtcaagataag
attgccgaacctttggaaaaaggacttgcccgacaaaactttggacttacagtgttcaaa
gatggaactgtcagatttgatgcgacaaactcacctctcacacaattcaaaccgtcttgg
attggaacctcaattgaaaaactcaaagaattaggttatacgcatgatattgatggcaac
ccccttgaaaatcctgaacagatagttgaactccgtatgcaagatgtggtaatcccctat
gaaagtggaagatatcttgtttctatctgcaaatacattgatacgcttttagaaaaattc
tatggtaaaactccattttacaatgtacacaactcaaaagaactgattggacatttggta
attggtcttgctcctcatacatcagttggcatagtaggtagaatcattggatattctgaa
acccatgtctgttttgcaactcccaactggcattcagcaaaaagaagggacgcagacggc
gatgctgactcaataatgttattgatggatagtcttttgaatttttcaagacaattcctt
tcagatgctataggtggattgatggatgcgccactgcttgttcaacctcttgttttacca
catgaatcccaaccacaagcacataatcttgaggtcacaaaatcatttcctttggaattt
tttgaatcaacaattcaacaagtcaaagccccagatatttcatcagttgaaattatcaaa
tctagacttgaaacagaaagacagttttatgactattatttcactcactcaacatcatct
cttacaacttcaaaatcacgcagtgcatattcgactcttggatcgatgctagacaaattt
gatatgcaagttaaaaatgcagaattgattgatgctgtaaatacttcagaaattgtttca
gatgtcatttcaactcatcttgtaccagacattatgggaaatctaagagcatatgctaga
caaaactttaggtgtactggatgtggtaaatcttatcgacgtatgccactaatccaaact
tgtgtatgtggccataaactaattcctacaataactcgtggctctgtagaaaaatatttg
aaacttgcaaaaagacttgttgacaaatatgatgttagtgaatatcaacggggaaggatt
catgcacttgctgatgaaattgaattagtatttggaaaaagtccaggcgaccaatcactt
cttacagactatgcctga
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