Neisseria lactamica: NLA_0710
Help
Entry
NLA_0710 CDS
T01368
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nla
Neisseria lactamica
Pathway
nla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NLA_0710 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nla03021
]
NLA_0710 (rpoC)
03400 DNA repair and recombination proteins [BR:
nla03400
]
NLA_0710 (rpoC)
Enzymes [BR:
nla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NLA_0710 (rpoC)
Transcription machinery [BR:
nla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NLA_0710 (rpoC)
DNA repair and recombination proteins [BR:
nla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NLA_0710 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CBN86315
UniProt:
E4Z9X0
LinkDB
All DBs
Position
82469..86644
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKIIVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTL
ATWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSGSASKLLRP
TVKLLDENGVEICIPGTSTSVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQEVG
QETAETQVTDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccatcaaaatcggcattgcttctcccgaaaccatccgttcatggtcttacggcgaagtt
aaaaaacctgaaaccatcaactaccgtacgttcaaacctgagcgcgacggtctgttctgc
gccaaaatctttggtccggtcaaagactacgaatgtttgtgcggtaaatacaaacgcttg
aaatttaaaggcgtaacctgtgaaaaatgcggcgtagaagtgaccctgtccaaagtgcgc
cgcgaacgcatgggccacattgaattggccgcaccggttgcccatatttggttcttgaaa
tccctgccttcccgcttgggtatggtactggacatgactttgcgcgacatcgagcgcgta
ttgtactttgaagcatttgtggtaaccgaccccggtatgactccgctgcaacgccgccaa
ttgctgactgaagacgattattacaacaagctggacgaatacggtgacgacttcgatgcc
aaaatgggtgcggaaggtatccgagaattgctgcggaccttgaatgtggcgggcgaaatc
gaaatcctgcgtcaagagctggaatctaccggttctgacaccaaaatcaaaaaaatcgcc
aaacgtttgaaagtattggaagccttccaccgttccggtatgaaactggaatggatgatt
atggacgtgctgccggtattgccgcctgatttgcgtccgttggttccattggatggcggt
cgttttgccacttccgatttgaacgatttgtaccgtcgcgtcatcaaccgcaacaaccgt
ctgaaacgtctgttggaactgcacgcgcccgacattatcgtccgcaacgaaaaacgtatg
ttgcaagaagcagttgactctctgttggataacggccgtcgcggtaaagccatgaccggt
gccaacaaacgtccgttgaaatcattggcagatatgattaaaggtaaaggcggccgtttc
cgtcaaaacctgctgggtaaacgtgtggactattcaggtcgttccgtgattaccgtaggc
ccatacctgcgcctgcaccaatgcggtctgccgaaaaaaatggcgttggaactgttcaaa
ccgttcattttccacaaattggaaaaacaaggtttggcttctaccgttaaagctgcgaaa
aaattggtagagcaagaagtacctgaagtatgggacatcttggaagaagtcatccgcgaa
catccgattatgctgaaccgtgcaccaaccctgcaccgtttgggtattcaagcgtttgag
cctattctgatcgaaggtaaagcgattcagttgcacccattggtgtgtgccgcatttaat
gccgactttgacggtgaccaaatggcggtacacgttccattgagcttggaagcgcaaatg
gaagcgcgcaccctgatgctggcttcaaacaacgtattgtctccggccaacggcgaacca
atcatcgtaccttctcaagatatcgtattgggtctgtactacatgacccgcgaccgtatc
aatgccaaaggcgaaggcagcctgtttgccgatgtgaaagaagtgcatcgtgcataccat
accaaacaggtcgagctgggtacgaaaatcatcgtacgtctgcgcgaatgggtgaaaaac
gaagccggagaattcgagcctgtcgttaaccgttacgaaacaaccgtcggccgcgcattg
ttgagcgaaatcctgccgaaaggcctgccgtttgaatatgtcaacaaggcgttgaagaaa
aaagaaatttctaaactgattaacgcatcgttccgtctgtgcggcttgcgtgacacagtt
attttcgccgaccacctgatgtacaccggtttcggttttgcggccaaaggcggtatttcc
attgcggttgacgatatggaaattccgaaagaaaaagcagccttgctggctgaagccaat
gccgaggttaaagaaatcgaagaccaataccgtcaaggtttggtgaccaacggcgaacgt
tacaacaaagtagtcgatatttggggtcgtgccggcgataagattgctaaagcgatgatg
gacaacctgtccaaacaaaaagttatcgaccgtgacggcaacgaagtcgatcaagagtca
ttcaactccatctatatgatggcggactccggtgcccgtggttctgcggctcagatcaaa
cagttgtccggtatgcgcggtttgatggcgaaacctgacggatcgattattgaaacgccg
attacctcaaacttccgcgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaaaggtttggcggataccgcattgaaaaccgcgaactccggttacctgacccgc
cgtttggtagacgtaactcaagacttggtggttgttgaagacgattgcggcacttcagac
ggctttgtgatgaaggcagtggtacaaggcggtgatgtgattgaagcattgcgcgatcgt
attttgggtcgtgttaccgcgtctgacgttgtcgatccgtcaagtggcgaaactttggtt
gaagccggtacgttgctgactgaaaaactggtggatatgatcgaccaatccggtgtcgat
gaagtcaaagtccgtacgccgattacttgtaaaacccgtcacggcctgtgtgcacactgt
tacggtcgtgacttggcacgcggcaaactggttaacgccggtgaggcagtcggtgtgatt
gctgcacaatccattggtgaaccgggtacccagttgaccatgcgtacgttccacatcggc
ggtgcggcatcccgtgcggcagcagccagccaagttgaagccaaatccaacggtacggca
cgattcagcagccaaatgcgttatgttgccaacaacaaaggtgagctggttgtcatcggc
cgttcttgtgaagtcgtgattcatgacgatatcggccgtgaacgcgaacgccacaaagta
ccttacggtgccatcctgctggtacaagacggtatggccattaaagctggtcaaaccttg
gcaacttgggatccgcatacccgtccgatgattaccgaacacgcaggtatggtgaaattc
gaaaacgtggaagagggtgttaccgttgccaaacaaaccgatgatgtaaccggtttgtcc
actttggtagtgattgacggcaaacgccgctccggcagcgcatccaaattgctgcgtccg
actgtgaaactcttggacgaaaacggcgtggaaatctgtattcccggtacgtccacttcg
gtttcgatggcattccccgttggtgcggtgattaccgtacgcgaaggtcaggaaatcggt
aaaggcgacgtattggcgcgtatcccgcaagcctcttccaaaacccgcgacattaccggc
ggtctgccgcgcgttgccgagttgtttgaagcacgcgtgccgaaagatgccggtatgctg
gcggaaattaccggtaccgtttccttcggtaaagaaaccaaaggcaaacagcgtctgatt
attaccgacgtggacggtgtggcatacgaaaccctgatttccaaagagaaacagattttg
gtacacgacggtcaagtggtaaaccggggcgaaaccattgtggacggcgcggtcgatccg
cacgatattctgcgtctgcaaggtatcgaagcactggcacgctacattgtccaagaggtg
caagaggtttaccgtctgcaaggtgtgaagatttccgacaaacacatcgaagtcatcatc
cgtcaaatgttgcgccgtgtgaacattgcggatgccggcgaaaccggcttcattaccgga
gagcaggtcgaacgcggcgatgtgatggctgccaatgaaaaagctttggaagaaggcaaa
gaaccggcacgttacgaaaacgtattgctgggtattaccaaagcctccctgtccaccgac
agcttcatttccgccgcatcgttccaagaaacgacccgcgttctgaccgaagccgcgatt
atgggcaaacaagacgagctgcgcggtctgaaagagaacgtgattgtcggtcgtttgatt
cctgccggtaccggtttgacttaccaccgcagccgccatcaacaatggcaagaggtaggg
caggagactgctgaaacccaagtaacggatgaataa
DBGET
integrated database retrieval system
