Neisseria lactamica: NLA_13920
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Entry
NLA_13920 CDS
T01368
Symbol
recJ
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nla
Neisseria lactamica
Pathway
nla03410
Base excision repair
nla03430
Mismatch repair
nla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLA_13920 (recJ)
03430 Mismatch repair
NLA_13920 (recJ)
03440 Homologous recombination
NLA_13920 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nla03400
]
NLA_13920 (recJ)
DNA repair and recombination proteins [BR:
nla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NLA_13920 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLA_13920 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLA_13920 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
TadZ_N
Motif
Other DBs
NCBI-ProteinID:
CBN87611
UniProt:
E4ZE27
LinkDB
All DBs
Position
complement(1525083..1526783)
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AA seq
566 aa
AA seq
DB search
MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLAALLPYQTLTNCEA
AAGRLADAVERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE
LAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTDHHLPADTVPDCIIVNPNQKG
CGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEPNLGDLLDLVALGTVADVVSLDH
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDIGFALGPRINAAGRLDDMSV
GIACLLARDDVEAQELAAQLNNLNIERREIEQSMLQDALNAFPETLPPGQTTLVAYRDDF
HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPNLILK
FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTFITDGSLKACDITLEQAQNL
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIR
TVYRPVANEWRNNLELQLYIDYWEAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaaatccaaacccgctccgtcaataccgacgtttttaatcatttgctcacc
gccggcgccgatcctttaatcgcccggctttgtgcctcgcgcggtgtgcaaagtcccgcc
gaattggacgacaagcttgctgcgcttttgccgtatcaaacgttgacaaactgcgaagcc
gccgccggccgtttggcggatgcggttgagcgtcaggaaaaaatcctgattgtcgccgac
tacgatgccgacggcgcgacggcgtgttccgtcggtatgagcggtttggcggcgatgggg
gcgaaagtggatttcctcgtgcccaaccgctttgagcacggctacggcttaacgcccgag
ctggctgaaatcgcggcagagcaaggtgtggatttgctgattacggtcgataacggtatc
gccagcatcgcaggcgtggcgcgcgcgcaggctctgggtttggatgtgattgtgaccgac
caccatctgcctgccgataccgtacccgactgcatcatcgtcaatccgaaccaaaaaggc
tgcggtttccaaagcaaaagcttggcgggcgtgggcgtgattttttatgtactgatggct
ttgcgtgccgaactgcgccgccgcaattatttttcagacggcctaaaagagccgaatctg
ggcgaccttttggatttggtcgcactcggtaccgttgccgacgtcgtctccctcgatcac
aacaaccgtatcctcgtgtcgcaaggtttgaaacggatgcgttcgggcaaaatgcgcccc
ggtatccgcgccttgtttgaagtggcgcgacgcgactggcgcaaggctcagcctttcgat
atcggctttgcgttgggcccgcgcatcaatgccgccggacggctggacgatatgtcggtc
ggcattgcctgtctgttggcgcgagatgatgtggaagcgcaggaactggcggctcagtta
aacaacctcaatatcgagcgtcgcgaaatcgagcagtctatgctgcaagacgcgctgaat
gcttttcctgaaaccctgcctccaggtcagacgacgttggtggcgtatcgcgacgacttc
catcaaggcgtggtcggcatcgttgccagccgcctcaaagaccgtttttatcgtccgacc
atcgtgtttgcgcctgccgacaacggcgaagtgcgcggttcggggcgttccattcccaat
ttgcacctgcgcgatgctttggacttggtgtccaaacgccatcccaatttgattttgaaa
ttcggcggacacgcgatggcggcgggcttgagcatactcgaacacaatatccccgcgttt
cagacggcctttgaagaagccgtgcgcgagatggtgtgcgaagacgatttgtcgcaaacc
ttcatcaccgacggcagcctgaaagcctgcgacatcacgttggaacaggcgcaaaatctt
gcccgacacgtttgggggcagggcttcgcgccgccgagttttaccgacgaatttcacgtc
gtccgccagcaacctttgggcgcggaaggcaaacacaaaaaagcgtggctgcaaaaagac
ggttgcgaatttgaagccatgttttggcgttgtagcgaagacattcccgaatacatccgc
acggtgtaccgccccgttgccaacgaatggcggaataatctcgaattacagctttatatc
gactactgggaagcggcgtag
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