Neisseria lactamica: NLA_19810
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Entry
NLA_19810 CDS
T01368
Name
(GenBank) ribonuclease II-related protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nla
Neisseria lactamica
Brite
KEGG Orthology (KO) [BR:
nla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nla03016
]
NLA_19810
Enzymes [BR:
nla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NLA_19810
Transfer RNA biogenesis [BR:
nla03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NLA_19810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CBN88179
UniProt:
E4ZAL1
LinkDB
All DBs
Position
2127572..2129452
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AA seq
626 aa
AA seq
DB search
MNIFYEESGQFKVAAVVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIALYAAPVYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKHGEMPSEIAADLKTILHAPDKQSLTYKAF
TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPSLAVKPGDKMEQVIMQRLSTVYFPN
GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSEFNVGAPACKIEAVNIAANLRIQAIEP
HFNAETGLDEAGEMMFAHHQDLIWFYQFATALQKARGKYEPDRAPQYDYSIELDEEGKVS
VVRRERGSPIDTLVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLLSLIDDSAEPLYQNSDAELFAALRDFDAAYTAYADFQR
QMEAYWSLVYLQQQSISELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL
DAEKQFIALNYIKAAAPAGKTAGNAV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccaattcaaagtcgccgccgtcgtccaaaaaaac
gatgccacctaccaagtcgatacccaacacggcaaacgcaccaaagtgaaggcaaacaat
gtctttgccgagtttgacggcgatatggcggcgtttttggaaaacgcgcaggcgcaggcg
gcggacatcgacaccgatttattgtgggaagtatgcggcgaagaggaatttaccgccgaa
gccatcgccgaagaatattacggtcatgcgccgaccaaaaccgagctggcggcaactttg
attgcactttacgccgcgccggtgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcgcccgaagaaaccttaaaacaagcgcttgccgccatcgaacgcaaaaaacagcaggac
gcacaaatcgacgcttgggcagaagccttgaaacacggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcctacacgcgcccgacaagcagtcgctgacctacaaagccttt
accaaagccgccgacgcgctgaaaacctccgcctacgaactggcgaaaaaaacgggcggc
attacgtccattccccaatacctgcaagacggttttgaaatcaaatacttccccaaagga
acaggcttccccgaccttccccttcccgaaatgcccgacctgcccaaggccgacgttacc
gccttttccatcgacgacgaatcgaccaccgaagtggacgatgctttaagcctgaccgac
ttgggcaacggcacgaagcgcgtcggcatccacattgccgcgccgtcgcttgccgttaaa
ccgggcgacaaaatggaacaagtcattatgcagcggttgagtacggtttattttcccaac
ggcaaaatcactatgctgcccgaaaactggattgccgcgttcagccttgatgcaggcgcg
taccgtcctgccgtcagcatttattttgatgtggacagcgagttcaacgtcggcgcaccg
gcctgcaaaatcgaagccgtcaacatcgccgcaaacctgcgtatccaagccatcgagccg
catttcaacgccgaaaccggcttggacgaagccggcgaaatgatgttcgcccaccatcaa
gacctgatttggttctaccaattcgccaccgccctgcaaaaagcgcgcggcaaatacgaa
cccgaccgcgcgccgcaatacgattacagcatcgaattggatgaggaaggcaaggtatcc
gtcgtccgccgcgaacgcggttcgcccatcgatacactggtcagcgagatgatgattttg
gccaacagcacttgggcgcagatgctccacgacaacgacctgcccggccttttccgcgtc
caaccggcaggcaaagtgcgtatgagcaccaaatccgagccgcacatcggtatgggcgtg
cagcattacggctggtttacctcgccgctgcgtcgcgccgccgactacatcaaccaaaaa
caactcctcagcctgatagacgactccgccgagccgctgtatcagaacagcgatgccgag
ctttttgccgcactgcgcgactttgatgccgcctataccgcctacgccgatttccaacgg
cagatggaagcctactggagcctggtttacctgcaacagcaaagcatcagcgaactgacc
gcgacgattctgaaagaagacctcgtccgcatcgaaggcctgccgctggtcacgcgcgcg
accggtattccgtttgacgcgctgcccaaatcgcaggcattgttcaaaatcaccgaattg
gatgccgagaagcagtttatcgcgctcaactacatcaaggcagccgcacctgcgggcaaa
acggcaggcaatgccgtctga
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