Nocardioides lacus: P5P86_01745
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Entry
P5P86_01745 CDS
T11404
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nlb Nocardioides lacus
Brite
KEGG Orthology (KO) [BR:
nlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlb03032
]
P5P86_01745 (gyrA)
03400 DNA repair and recombination proteins [BR:
nlb03400
]
P5P86_01745 (gyrA)
Enzymes [BR:
nlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P5P86_01745 (gyrA)
DNA replication proteins [BR:
nlb03032
]
Prokaryotic type
DNA Topoisomerases
P5P86_01745 (gyrA)
DNA repair and recombination proteins [BR:
nlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P5P86_01745 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Ig_mannosidase
DUF6306
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WGL52560
LinkDB
All DBs
Position
384928..387579
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AA seq
883 aa
AA seq
DB search
MTETPIPPAGGRVQPIELQASMQQSYIDYAMAVIVGRALPDVRDGLKPVHRRVLYAMYDG
GYRPDRGFNKCARVVGDVMGNYHPHGDSAIYDTLVRLAQPWVMRNPLVNGQGNFGSPGND
PAAAMRYTECRMAPLAMEMVRDIDEGTVDMTPNYDGKTNEPTILPARFPNLLVNGSAGIA
VGMATNIPPHNLREVAEGAKWALRNPEATREELQDALVERIKGPDFPNGALIVGRSGIEQ
AYRTGRGSITQRAVIEVDEDKSGRTMLVITELPYMVNPDNLIVKIAELADGGRVQGIAEV
RNETSSRVGQRIVVVLKRDAVARVVLNNLLKHTELQTNFSANMLALVDAVPRTLTIDQFI
SNWVAHQIDVIRRRTEFRLRKAEERAHIFRGLVKALDALDEVIALIRRSPEVDDARQGLI
ALLEIDELQANAILDMQLRRLAALERQKIVDQLAELELEIADYLDILAKPERQRAIVIEE
LEEIVEKYGDERRSQIIAADGDLSMEDLIPDEDLVVSITRGGYAKRTRADQYRTQKRGGK
GVRGASLRGDDVVEHFISTTNHHWLLFFTTAGRVYRTKAYNLPEASRDAKGGHVAGLLSF
QPDENIAQVLAIRDYDQAPYLVLATRAGLVKKTRLADYNSPRQAGVIAINFREEDDELIG
AELVHDEDHILLVSRKGQAIRFPAANDQLRPMGRATSGVTGMKFRPGDDLLSMSVIRAAD
AAHEESDEDVQYVFTITDGGFAKRTRISEYRLQSRGGLGIKAMALANEDRGSLVGAFIVK
DGDEVLSITTTGQVVRSPINADFRPTGRSTQGVKFVSPKKGDAVAVVARSVEAREDEEEL
DAEAEVPVEVAEDATIEPNAESGEPTGSTDSSTDDGTDEGADG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacaccgattcctcctgctggaggccgcgtccagccgatcgagctgcaggcc
tccatgcagcagtcctacatcgactacgcgatggcggtcatcgtcgggcgagcgctgccc
gacgtacgcgacggcctcaagccggtccaccggcgcgtgctctacgcgatgtacgacggc
ggctaccggcccgaccgcggcttcaacaagtgtgcccgcgtcgtcggcgacgtgatgggt
aactaccacccgcacggtgactcggcgatctacgacaccctcgtgcggctcgcccagccc
tgggtgatgcgcaacccgctggtcaacggccagggcaacttcggctcaccgggcaacgac
ccggcggccgccatgcgttacaccgagtgccggatggcgccgttggccatggagatggtg
cgcgacatcgacgaaggcaccgtcgacatgacgcccaactacgacggcaagaccaacgag
ccgacgatcctgcccgcgcgcttcccgaacctgctggtcaacggctcggccggcatcgcc
gtcggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgccgagggcgcgaag
tgggcgctgcgcaatcccgaggccacccgcgaggagctgcaggacgcgctggtcgagcgg
atcaagggccccgacttccccaacggtgcgctgatcgtcggtcgctccggtatcgagcag
gcctaccggaccggtcgcggctcgatcacccagcgtgcggtcatcgaggtcgacgaggac
aagtccggtcggaccatgctggtcatcaccgagctgccctacatggtcaacccggacaac
ctgatcgtgaagatcgccgagctcgccgacggcggccgcgtgcagggcatcgccgaggtg
cgcaacgagacctcctcccgcgtcggccagcggatcgtggtcgtgctcaagcgcgatgcc
gtcgcgcgcgtggtgctgaacaacctgctcaagcacaccgagctgcagaccaacttcagc
gccaacatgctggcgctggtcgacgccgtaccgcggacgctgaccatcgaccagttcatc
agcaactgggtcgcacaccagatcgacgtcatccgccggcgcacggagttccggctgcgc
aaggccgaggagcgggcccacatcttccgcggcctggtcaaggcgctcgacgcgctcgac
gaggtcatcgcgctgatccggcgctcgcccgaggtcgacgacgcccggcagggcctgatc
gcgctgctggagatcgacgagctccaggccaacgcgatcctcgacatgcagctgcgccgg
ctggccgccctcgagcggcagaagatcgtggaccagctggccgagctcgagctggagatc
gcggactacctcgacatcctcgccaagccggagcggcagcgggcgatcgtcatcgaggag
ctcgaggagatcgtcgagaagtacggcgacgagcgccgcagccagatcatcgccgccgac
ggtgacctgtccatggaggacctcatccctgacgaggacctggtggtctccatcacccgc
ggcggctacgccaagcgcacccgcgccgaccagtaccgcacccagaagcgcggcggcaag
ggcgtgcgcggtgcgtcgctgcgcggcgacgacgtggtcgagcacttcatctcgaccacc
aaccatcactggctgctgttcttcaccaccgcgggccgggtctaccggaccaaggcctac
aacctgccggaggcctcgcgcgacgccaagggcggtcacgtcgcgggcctgctcagcttc
cagccggacgagaacatcgcccaggtgctggcgatccgcgactacgaccaggcgccgtac
ctcgtcctggcgacgcgcgccgggctggtcaagaagacccgcctggccgactacaacagc
ccccggcaggccggcgtcatcgccatcaacttccgcgaggaggacgacgagctgatcggc
gccgagctggtgcacgacgaggaccacatcctgctggtctcgcgcaagggccaggcgatc
cgcttcccggcagccaacgaccagctgcggccgatggggcgcgccacctccggcgtgacg
gggatgaagttccgtcccggcgacgacctgctctcgatgtcggtgatccgggcggccgac
gcggcccacgaggagtccgacgaggacgtccagtacgtcttcaccatcaccgacggcggc
ttcgccaagcgcacccggatctccgagtaccggctgcagtcgcgtggcggtctgggcatc
aaggcgatggcactggccaacgaggaccggggcagcctggtcggcgcgttcatcgtcaag
gacggcgacgaggtgctctccatcaccactaccggtcaggtcgttcgcagccccatcaac
gcagacttccgaccgaccggccgctcgacccagggcgtgaagttcgtgtcgccgaagaag
ggcgacgcggtggctgtggtggcccgttcggtcgaggctcgcgaggatgaggaggagctc
gacgccgaggccgaggttccggtcgaggttgccgaggatgcaacaatcgagcccaatgcc
gagtcgggcgagccgaccggaagcactgacagcagcacggacgacggcacagacgaggga
gctgacggctga
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