Nocardioides lacus: P5P86_06200
Help
Entry
P5P86_06200 CDS
T11404
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nlb Nocardioides lacus
Pathway
nlb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P5P86_06200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlb03400
]
P5P86_06200
Enzymes [BR:
nlb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
P5P86_06200
DNA repair and recombination proteins [BR:
nlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
P5P86_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WGL53418
LinkDB
All DBs
Position
complement(1331632..1332420)
Genome browser
AA seq
262 aa
AA seq
DB search
MRIATWNVNSIRTRIDRVHALLDRHEIDVLAVQETKAKVDQIPTMELELRGYEMAAVGHS
QWNGVAIFSRVGLEDVQVGFEGMPLYGDPEHAEARAISAVCGGVRVMSLYVPNGRKPDDP
HYVYKLDWLARLREASQAWLDTPTALVGDWNVCPYDEDCFDPSQFKNSTHLTPAERAAFF
AIEADYSDVVRPYAPGPEVYTYWDYYRQRFERNRGLRIDFVLGSPSFASRVSGAFIDRDE
RDPAQGSGAPSDHAPVVVDLGD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatcgccacctggaacgtgaactccatccgcacccggatcgaccgcgtgcacgcc
ctcctcgaccggcacgagatcgacgtgctcgccgtacaggagaccaaggccaaggtcgac
cagatcccgacgatggagctcgagctgcgcggctacgagatggcggcggtgggtcactcg
cagtggaacggcgtggcgatcttctcccgcgtcggcctggaggacgtccaggtggggttc
gagggcatgcccctgtacggcgaccccgagcacgccgaggcccgcgccatctccgcggtc
tgcggcggggtgcgggtgatgtcgctctacgtccccaacgggcgcaagcccgacgatccg
cactacgtctacaagctcgactggctcgcccggctccgggaggcgtcgcaggcctggctg
gacacgccgaccgccctggtcggcgactggaacgtctgcccctatgacgaggactgcttc
gacccctcgcagttcaagaactccacccacctgacgccggcggagcgggccgcgttcttc
gcgatcgaggccgactacagcgacgtggtgcggccctacgcgccgggccccgaggtctac
acctactgggactactaccggcagcgcttcgagcgcaaccgcggcctgcggatcgacttc
gtcctgggctcgccgtccttcgcctcccgggtgagcggcgccttcatcgaccgcgacgaa
cgcgacccggcgcagggcagcggggcaccctcggaccacgctccggtcgtcgtcgacctg
ggcgattga
DBGET
integrated database retrieval system
