Nocardioides lacus: P5P86_08510
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Entry
P5P86_08510 CDS
T11404
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nlb Nocardioides lacus
Pathway
nlb00470
D-Amino acid metabolism
nlb00550
Peptidoglycan biosynthesis
nlb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nlb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P5P86_08510 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P5P86_08510 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nlb01011
]
P5P86_08510 (murD)
Enzymes [BR:
nlb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
P5P86_08510 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nlb01011
]
Precursor biosynthesis
Amino acid ligase
P5P86_08510 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
gpD
ELFV_dehydrog
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WGL53857
LinkDB
All DBs
Position
1808351..1809844
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AA seq
497 aa
AA seq
DB search
MTRSGSTGPDPAALGRRDSWEGVRAVVAGFGVSGFAAADNLLHLGAEVTALDESTGDEER
QEKAELLRVLGADVRLGAGQTARLPEDVDVLVTSPGWRPSAPLLAQARDRGIPIWGEVEL
AWRLRDTGPGGNAAPWLAVTGTNGKTTTVQMLDTILRTAGLRSVAVGNVGLPIVEAVMDP
APYDVFAVELSSFQLHYTQSMAAESAAVLNLAEDHLDWYGSMEEYAADKGRIYERVSRAC
VYNAADELTRHLVEEAEVQEGARAIGFTLGMPGVGMVGVVEDILVDRAFIAERQTSAAEL
CTIDDLGQALGHTPAPHYVQNALAAAALARAHGVSPRAVRDGLRSFRPDGHRIETVATHG
GITWVDDSKATNPHAAQASLQAYDPVVWIAGGLAKGAHFEGLVPSVRDRLRGVVLIGRDQ
DVIAEALARHAPDVPVIALPADETGAAVMGHAVQAAARLAVAGDTVLLAPGCASQDQFRD
YKARGDAFVAAVRDQIS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgctccggatccaccggcccggaccccgcggccctggggcggcgcgactcctgg
gagggcgtgcgcgccgtcgtcgccgggttcggcgtctccggcttcgccgccgccgacaac
ctgctccatctcggcgcggaggtgacggcgctcgacgagtcgaccggggacgaggagcgt
caggagaaggccgagctgctccgggtgctgggcgccgacgtacggctcggtgcgggccag
acggcgcggctgcccgaggacgtcgacgtgctggtgacctctcccgggtggcggccgtcg
gcgccgctgctggcgcaggcccgcgaccgcgggatcccgatctggggcgaggtggagctg
gcctggcggctgcgcgacaccggacccggcggcaacgccgcgccgtggctggcggtgacc
ggcacgaacggcaagaccacgaccgtgcagatgctcgacaccatcctgcgcaccgccggc
ctgcgctcggtcgccgtcggcaacgtcggcctgccgatcgtggaggcggtgatggatccg
gcgccctacgacgtcttcgcggtcgagctctccagcttccagctgcactacacgcagtcg
atggcggccgagagcgcagcggtgctcaacctcgccgaggaccacctcgactggtacggc
tcgatggaggagtacgccgccgacaagggccgtatctacgaacgtgtcagccgggcgtgc
gtctacaacgccgcggacgagctcacccgccacctggtcgaggaggccgaggtgcaggag
ggtgcacgggcgatcggcttcaccctgggcatgcccggcgtcggcatggtcggggtggtg
gaggacatcctggtcgaccgggcgttcatcgccgagcggcagacgagcgctgccgagctg
tgcacgatcgacgacctgggccaggcgctcgggcacaccccggcacctcactacgtgcag
aacgctctcgccgcggccgcgctggcccgggcgcacggcgtcagcccccgggcggtccgg
gacgggctgcgttccttccgccccgacggacaccggatcgagaccgtcgccactcacggc
ggcatcacctgggtggacgactccaaggccaccaacccgcatgccgcccaggcctcgctg
caggcctacgacccggtggtgtggatcgccggcgggttggccaagggcgcccatttcgag
gggctggtgccgtcggtgcgcgaccgcctccggggcgtggtgctgatcggacgtgaccag
gacgtgatcgccgaggctcttgcgcgacacgcccccgatgtcccggtgatcgcgctgccc
gccgacgagactggtgccgcagtcatggggcacgcggtgcaggccgccgcccggctcgca
gtcgccggagacacggtgctgctggcgccgggttgcgcgagtcaggaccagttccgcgac
tacaaggcgcggggcgacgcgttcgtcgccgcggtgcgggaccagatcagctag
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