Nocardioides lacus: P5P86_08795
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Entry
P5P86_08795 CDS
T11404
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nlb Nocardioides lacus
Pathway
nlb03030
DNA replication
nlb03410
Base excision repair
nlb03420
Nucleotide excision repair
nlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P5P86_08795 (polA)
03410 Base excision repair
P5P86_08795 (polA)
03420 Nucleotide excision repair
P5P86_08795 (polA)
03440 Homologous recombination
P5P86_08795 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlb03032
]
P5P86_08795 (polA)
03400 DNA repair and recombination proteins [BR:
nlb03400
]
P5P86_08795 (polA)
Enzymes [BR:
nlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P5P86_08795 (polA)
DNA replication proteins [BR:
nlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P5P86_08795 (polA)
DNA repair and recombination proteins [BR:
nlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
P5P86_08795 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P5P86_08795 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGL53910
LinkDB
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Position
1865784..1868507
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AA seq
907 aa
AA seq
DB search
MPSHIASSARPRLLLLDGHSLAYRAFFALPVENFSTTTGQHTNAVYGFTSMLINVLRDEQ
PTHVAVAFDVSRQTFRMEQYSEYKAKRNKTPDEFKSQLPLIEDVLTALHIPFLKKDGFEA
DDIIATLATQAREHGMDVLILTGDRDSLQLVRDEVTVLYPMRGVSDLARMTPEAVEAKYG
VSPQRYPELAALVGEDSDNLPGVPGVGPKTAAKWIATYDGLDNVITHADKITGKAGDNLR
AHLGDVIRNRQLNALVCDLELGRGPADLAVQPWDRQEVHTLFDSLEFRVLRDRLFETLTS
EEQIEEGGFDLDGRKLAAGEVAGFLDGLGSDRIGLHVRGAWGSGTGRVDGIAFATAPTPD
GAGRAGYLEVADLTPEDETALATWLADARRPKVLHDAKGPQLALAAHGWPLAGLASDTAL
AAYLVRPDQRSYDLADLTLRYLKRELKSEADDGQGALFDELEGGADDLAATAMLHARAVL
DLAHALDTELEGAGGTRLLADLELPLLGLLARMEQTGIAIDADHLDDLERHFAAEVKQAA
EEAYAVIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQALYVKTEHPFLLA
LLRHRDVTRLRVTIEGLLKTVQPDGRIHTTFNQTIAATGRLSSTDPNLQNIPIRTEEGRR
IREAFVVGHSVGGTAYDCLMTADYSQIEMRIMADLSGDQALIEAFRSGHDFHATTASRVF
GVPADEVSSEQRAKIKAMNYGLAYGLSAFGLSQQLGIEPAEARGLMDDYFQTFGGIRDYL
AGVVDEARRTGFTETILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMLN
TQAALDASGLASRMLLQVHDELVFEVAVGEREALEALVREQMGGAADLAVPLDVSVGTGR
SWHEAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagccacatcgcctcctccgcccgtccgcgcctgctgctgctcgacggccactcg
ctggcctaccgagccttcttcgcgctgccggtggagaacttctcgaccaccaccggccag
cacacgaacgcggtctacggcttcacctcgatgctcatcaacgtgctgcgcgacgagcag
ccgacccacgtcgccgtcgccttcgacgtctcccggcagacgttccggatggagcagtac
agcgagtacaaggccaagcggaacaagacgcccgacgagttcaagagccagctgccgctg
atcgaggacgtcctgaccgccctgcacatcccgttcctgaagaaggacggcttcgaggcc
gacgacatcatcgccactctcgcgacgcaggcgcgcgagcacgggatggacgtcctcatc
ctgaccggcgaccgcgactcgctgcagctggtccgcgacgaggtgacggtgctctacccg
atgcgcggcgtgtccgacctggcccgcatgacgccggaggcggtcgaggcgaagtacggc
gtgagcccgcagcgctatcccgagttggcggcgctggtgggggaggactccgacaatctt
cccggcgtgcccggtgtcgggcccaagaccgcggcgaagtggatcgccacctacgacggc
ctcgacaacgtgatcacgcatgccgacaagatcacgggcaaggccggtgacaacctgcgg
gcccacctcggcgacgtgatccgcaaccgccagctcaacgcgctggtctgcgacctcgag
ctcgggcgcggcccggccgacctggcggtccagccgtgggaccggcaggaggtgcacacg
ctcttcgacagcctggagttccgcgtgctgcgcgaccggctcttcgagaccctcaccagc
gaggagcagatcgaggaggggggcttcgacctcgacgggcgcaagctcgccgccggcgag
gtcgccgggttcctcgacggactcggctcggaccggatcgggttgcacgtgcgcggtgcc
tggggctcgggcacgggccgcgtcgacggcatcgccttcgccaccgcgcccaccccggac
ggtgccggtcgtgccggctacctcgaggtcgccgacctgacacccgaggacgagacggcg
ctcgccacctggctcgccgacgcccggaggcccaaggtgctccacgacgccaagggtccc
cagctcgcactcgccgcccacggctggccgctggcgggtctcgccagcgacaccgccctc
gccgcctacctggtgcgtcccgaccagcgctcctacgatctggcggacctgaccctgcgc
tacctcaagcgcgagctcaagtccgaagcggacgacgggcagggcgcgctcttcgacgag
ctcgagggcggcgccgacgacctcgccgccaccgcgatgctccacgcccgcgccgtcctg
gacctggcgcacgcgctggacaccgagctcgagggtgccggcggcacgcgcctgctggcc
gacctcgagctgccgctgctgggcctgctcgcgcggatggagcagaccgggatcgcgatc
gatgccgaccatctcgacgacctggaacggcacttcgccgccgaggtgaagcaggccgcc
gaggaggcctacgcggtgatcggcaaggagatcaacctcggctctcccaagcagctgcag
gtggtgctcttcgacgagctcgacatgcccaagaccaagcgcaccaagaccggctacacc
accgacgccgacgcgctgcaggcgctctacgtcaagaccgagcacccgttcctgctcgcg
ctgctgcgccaccgcgacgtcacccgcttgcgggtgacgatcgaggggctgctcaagacc
gtgcagccggacggtcgcatccacacgacgttcaaccagacgatcgccgccaccggtcgg
ctctccagcaccgatcccaacctgcagaacatcccgatccgcaccgaggagggccgccgg
atccgcgaggccttcgtggtggggcacagcgtggggggcacggcgtacgactgcctgatg
acggccgactacagccagatcgagatgcggatcatggcggacctgtccggcgaccaggcc
ctgatcgaggcgttccggtccggccacgacttccacgccaccaccgcctcccgcgtgttc
ggggtgccggccgacgaggtctcctccgagcagcgcgccaagatcaaggcgatgaactac
ggcctggcctacggcctgtccgccttcggtctctcccagcagctgggcatcgagcccgcg
gaagcccgcggcctgatggacgactacttccagaccttcgggggcatccgcgactacctg
gccggcgtcgtggacgaggctcgtcgcaccggcttcaccgagaccatcctgggccgccgt
cgctacctgcccgacctgaccagcgacaaccggcagcgtcgtgagatggccgagcggatg
gcgctcaacgcgccgatccagggatcggcggcggacctgatcaaggtggccatgctcaac
acccaggccgctctcgacgcctcagggctcgcgtcgcggatgctgctgcaggtgcacgac
gagctcgtgttcgaggtggcggtcggcgagcgcgaggcgctcgaggcgctggtccgcgag
cagatgggcggcgccgccgacctcgccgtaccgctcgatgtctcggtggggacgggccgc
tcctggcacgaggcggcgcactag
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