Nocardioides lacus: P5P86_17395
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Entry
P5P86_17395 CDS
T11404
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nlb Nocardioides lacus
Pathway
nlb00020
Citrate cycle (TCA cycle)
nlb00190
Oxidative phosphorylation
nlb00650
Butanoate metabolism
nlb00720
Other carbon fixation pathways
nlb01100
Metabolic pathways
nlb01110
Biosynthesis of secondary metabolites
nlb01120
Microbial metabolism in diverse environments
nlb01200
Carbon metabolism
Module
nlb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nlb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nlb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
P5P86_17395
00650 Butanoate metabolism
P5P86_17395
09102 Energy metabolism
00190 Oxidative phosphorylation
P5P86_17395
00720 Other carbon fixation pathways
P5P86_17395
Enzymes [BR:
nlb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
P5P86_17395
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
NAD_binding_8
GIDA
Motif
Other DBs
NCBI-ProteinID:
WGL51720
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Position
3688586..3690649
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AA seq
687 aa
AA seq
DB search
MASSTADLSGLVAHNEPSVQVSDDAAGFYELGDKLVDPKAPTGPIATRWTNRKFENRLVN
PANRRKLEVIIVGTGLAGGAAAATLGEAGYNVKSFFYQDSPRRAHSIAAQGGINAAKNYK
EDGDSVYRLFYDTVKGGDYRSRESNVYRLAEVSANIIDQCVAQGVPFAREYGGLLDNRSF
GGVQVSRTFYARGQTGQQLLLGAYQALERQVAAGTVTPYSRHEMLDVVIVDGKARGIIAR
DMVTGEIETHLADAVVLATGGYGNVYYLSTNAMGSNVTAAWRAHRKGAYMANPCYTQIHP
TCIPVTGAHQSKLTLMSESLRNDGRMWVPKKAEDCAKDPRDIPEEDRDYFLERIYPSFGN
LVPRDIASRAAKYMCDEGRGVGPQVDETDKDGNHVKVRRGVYLDLGAAIARLGKEAIEEK
YDNLLDMYERITGEDPYQVPMRIYPAVHYVMGGLWVGYDLQTNIDGLFCTGEANFSDHGA
NRLGASALMQGLSDGYFVLPNTIRDYLADGPFEKIDENHPAVLEARAGVQAQIDKFLSIN
GTRSVESIHKELGQIMWEYCGMERTKEGLTEAIAKIRDLKKEFWTNVKVLGSADSLNQDL
EKAGRVADFIELGELMCIDALNRRESCGGHFRAESQTPEGEALRHDEEFAYVAAWEWGGD
SLEGGKPVLHKEDLIYTAIEMKQRSYK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctccactgcagatctctccggtctcgtcgcccacaacgagccgtccgtccag
gtctccgacgacgccgccggcttctacgagctcggcgacaagctcgtcgacccgaaggca
ccgaccggtccgatcgcgacccgctggaccaaccgcaagttcgagaaccgcctggtcaac
ccggccaaccggcgcaagctcgaggtcatcatcgtcggcaccggcctcgccggtggcgcg
gccgcggcgaccctgggcgaggccggctacaacgtgaagtcgttcttctaccaggactcc
ccgcgccgggcccactcgatcgccgcccagggcggcatcaacgcggcgaagaactacaag
gaggacggcgactcggtctaccgcctcttctacgacacggtcaagggcggcgactaccgc
tcgcgcgagtcgaacgtctaccgcctggccgaggtctcggccaacatcatcgaccagtgc
gtcgcacagggcgtcccgttcgcccgcgagtacggcggcctcctcgacaaccgctccttc
ggcggcgtccaggtctcccgcacgttctacgcccgcggccagacgggccagcagctgctg
ctcggtgcctaccaggcgctggagcgtcaggtcgccgccggcacggtgacgccgtacagc
cgtcacgagatgctcgacgtggtcatcgtcgacggcaaggcccgcggcatcatcgcccgc
gacatggtcaccggcgagatcgagacccacctcgcggatgcggtcgtgctcgccacgggc
ggctacggcaacgtctactacctctcgaccaacgcgatgggctccaacgtcaccgccgcg
tggcgtgcccaccgcaagggcgcctacatggccaacccctgctacacgcagatccacccg
acctgcatcccggtgacgggcgcgcaccagtcgaagctgaccctgatgtcggagtccctg
cgcaacgacggccggatgtgggtgccgaagaaggccgaggactgcgccaaggacccgcgt
gacatccccgaggaggaccgcgactacttcctggagcggatctacccctccttcggcaac
ctggtcccccgtgacatcgcctcgcgggcagcgaagtacatgtgcgacgagggccgcggt
gtcggcccccaggtggacgagacggacaaggacggcaaccacgtcaaggtccgtcgcggg
gtctacctcgacctcggtgcggcgatcgcgcggctcggcaaggaggcgatcgaggagaag
tacgacaacctcctcgacatgtacgagcgcatcaccggcgaggacccctaccaggtcccg
atgcgcatctacccggccgtgcactacgtgatgggcgggctgtgggtcggctacgacctg
cagacgaacatcgacggcctgttctgcaccggcgaggccaacttctccgaccacggcgcc
aaccgcctcggcgcctcggcgctgatgcagggtctctccgacggttacttcgtcctgccg
aacaccatccgcgactacctcgccgacgggccgttcgagaagatcgacgagaaccacccg
gcggtgctggaggcgcgtgccggcgtgcaggcccagatcgacaagttcctgtcgatcaac
ggcacccgctcggtcgagtccatccacaaggagctcggccagatcatgtgggagtactgc
ggcatggagcggaccaaggagggcctcaccgaggccatcgccaagatccgcgacctcaag
aaggagttctggaccaacgtgaaggtcctcggctcggccgactccctcaaccaggatctc
gagaaggccggccgcgtggccgacttcatcgagctgggcgagctcatgtgcatcgacgcg
ctgaatcgtcgcgagtcctgcggcggccacttccgcgccgagtcgcagacccctgagggc
gaggcgctgcgccacgacgaggagttcgcctacgtcgcggcctgggagtggggcggtgac
tcgctcgagggcggcaagccggtcctgcacaaggaagacctgatctacacggccatcgag
atgaagcagcggagctacaagtga
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