KEGG   Nocardioides lacus: P5P86_17925
Entry
P5P86_17925       CDS       T11404                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nlb  Nocardioides lacus
Pathway
nlb00300  Lysine biosynthesis
nlb00470  D-Amino acid metabolism
nlb01100  Metabolic pathways
nlb01110  Biosynthesis of secondary metabolites
nlb01120  Microbial metabolism in diverse environments
nlb01230  Biosynthesis of amino acids
Module
nlb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nlb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    P5P86_17925 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    P5P86_17925 (dapF)
Enzymes [BR:nlb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     P5P86_17925 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WGL51820
LinkDB
Position
complement(3822204..3823046)
AA seq 280 aa
MSGSTYDFVKGHGTENDFVLLPDPDGSVHGPLSDERVRALCDRHAGIGGDGVLRVIRTAA
YAADWPGAPATTAEGEWFMDYRNADGSIAEMCGNGTRVFAAYLRAHHRAGEEIVVATRAG
DKRLTFDGELWTVDLGEPLLLGWSEVSVGESTWKARHVDMGNPHAVALVEEPVAGLDLGR
QPAFDAAIYPHGVNIELVERLGEGRLRMRVHERGVGETRSCGTGIGATAVATMEADGHVA
DGATYVVDVPGGRLTVTWTADDRVLLTGPAALVATGTTGL
NT seq 843 nt   +upstreamnt  +downstreamnt
atgagcggatccacctacgacttcgtcaagggccacggcaccgagaacgacttcgtcctg
ctgcccgaccccgacgggtcggtgcacggaccgctcagcgacgagcgcgtccgggcgctg
tgcgaccgccacgccggcatcggcggcgacggcgtcctgcgcgtcatccgtacggcggcg
tacgcggccgactggccgggcgcgcccgccaccaccgccgagggcgagtggttcatggac
taccgcaacgccgacggctcgatcgccgagatgtgcggcaacggcacccgcgtcttcgcc
gcctacctgcgggcgcaccaccgcgccggcgaggagatcgtcgtcgcgacccgcgccggc
gacaagaggctgaccttcgacggcgagctgtggaccgtcgacctgggcgagccgctgctg
ctgggctggtccgaggtgtcggtcggcgagagcacctggaaggcgcgccacgtcgacatg
ggcaacccgcacgcggtcgcgctggtcgaggagccggtggccggcctcgacctgggccga
cagccggccttcgatgcggcgatctacccgcacggggtgaacatcgaactggtcgagcgc
ctcggcgagggtcgcctgcggatgcgggtgcacgagcgcggcgtgggggagacccggtcg
tgcggcaccgggatcggcgccacggccgtcgccacgatggaggcggacgggcacgtggcg
gacggggcgacgtacgtcgtcgacgtgccgggcggccggctcaccgtcacctggaccgcc
gacgaccgggtcctgctgaccggcccggccgcactggtcgccaccggcaccaccgggctg
tga

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