Nitrosospira lacus: EBAPG3_000100
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Entry
EBAPG3_000100 CDS
T04907
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00906
Carotenoid biosynthesis
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EBAPG3_000100 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nlc01006
]
EBAPG3_000100 (hpnD)
Enzymes [BR:
nlc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
EBAPG3_000100 (hpnD)
Prenyltransferases [BR:
nlc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
EBAPG3_000100 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ARO88940
UniProt:
A0A1W6ST08
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All DBs
Position
complement(25140..25985)
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AA seq
281 aa
AA seq
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MTPDQYCQEKAIQSGSSFYYSFLYLPTERRRAITALYAFCREVDDVVDECTDASVARTKL
AWWRQEVAAIFDAGHGNEPSHPVAKALVNVSKIFNLTAERLNEIIDGMEMDLNYNRYADF
ETLRLYCYHVASVVGLCSAEIFGYRNPDTLKYAQDLGLAFQLTNIIRDVGEDARRDRIYL
PQDELVRFGVSNEDILHSRETDSFKRLMEFQIERAESYYARAFAALPAEDRKNQRPGIVM
AAIYQALLKEIKEDGCRIMRQRVSLTPMRKLWIAWTTWIKG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgactccagatcagtactgtcaggaaaaagcgattcaaagcggttccagtttctattac
agctttctctatctgccaacggagagacgccgcgccattactgccttatatgctttctgc
cgcgaggtggacgatgtggtggatgagtgcaccgatgcgtcggtggcgcgaacgaaactt
gcgtggtggcggcaggaagttgccgccatatttgatgccggacatggaaatgaacccagc
catccggtggctaaagcgctggttaacgtgtcgaaaatattcaatctcaccgctgagcga
ttgaatgagatcattgatggcatggaaatggatcttaattataatcgctatgctgatttc
gaaaccttgcggctatattgctatcatgtggcgagcgtggtgggattatgttcggcggag
atttttggctatcgcaatcccgataccctgaagtatgcgcaggatttggggctcgcattc
cagctcaccaacatcatacgcgacgtcggcgaagacgcacgtcgcgaccgtatctatctg
ccccaggatgaattggtacgttttggcgtatcgaacgaggacatccttcattcgcgtgaa
accgacagcttcaaacggctgatggagtttcagattgagcgtgcggaaagttattacgct
cgggctttcgcagcattgcctgcggaggaccgaaaaaaccagcgccccggcattgtcatg
gcggcgatttatcaagctctgctaaaggagatcaaggaggacggttgtcgtattatgcgg
caacgcgtaagtcttacgccgatgcgtaaattgtggatagcatggacgacctggatcaag
gggtga
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