Nitrosospira lacus: EBAPG3_000105
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Entry
EBAPG3_000105 CDS
T04907
Symbol
groL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBAPG3_000105 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlc03019
]
EBAPG3_000105 (groL)
03110 Chaperones and folding catalysts [BR:
nlc03110
]
EBAPG3_000105 (groL)
03029 Mitochondrial biogenesis [BR:
nlc03029
]
EBAPG3_000105 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlc04147
]
EBAPG3_000105 (groL)
Enzymes [BR:
nlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EBAPG3_000105 (groL)
Messenger RNA biogenesis [BR:
nlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EBAPG3_000105 (groL)
Chaperones and folding catalysts [BR:
nlc03110
]
Heat shock proteins
HSP60 / Chaperonin
EBAPG3_000105 (groL)
Mitochondrial biogenesis [BR:
nlc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EBAPG3_000105 (groL)
Exosome [BR:
nlc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EBAPG3_000105 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EBAPG3_000105 (groL)
Exosomal proteins of breast cancer cells
EBAPG3_000105 (groL)
Exosomal proteins of colorectal cancer cells
EBAPG3_000105 (groL)
Exosomal proteins of bladder cancer cells
EBAPG3_000105 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
ARO86311
UniProt:
A0A1W6SKI3
LinkDB
All DBs
Position
complement(26258..27916)
Genome browser
AA seq
552 aa
AA seq
DB search
MAAKEVKFGDSARHKMVAGVNILADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVKEGMKYVAAGMNPMDLKRGI
DKAVAATVEELKKLSKPCTTGKEIAQVGSISANSDPEIGKIIADAMEKVGKEGVITVEDG
SGLQNELEVVEGMQFDRGYLSPYFINNPDRQIALLENPFVLLHDKKISNIRELLPVLELV
AKAGKPLLIIAEDVDGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEVGLSLEKATLKELGQAKRIEVGKEETTVIDGAGDAANIEGRVKQVRKQIDEATSDY
DKEKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RTLSAVASLKGDNHDQDAGIKIVLRALEEPLRQIVANCGDEPSVVINKVLEGKGNFGYNA
ATSEYGDMVEMGVLDPTKVTRYALQHAASVASLMLTTDALVAESPKEESGGGGGMGGMGG
MGGMGGMGGMDM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagaagtgaaatttggcgattcagcccgccacaaaatggtggccggggtc
aacattctggccgatgcggttaaagttacccttggccccaaggggcgcaatgttgtcctg
gagcgttcttatggcgcacccactattaccaaggatggtgtctcggtagcgaaagaaatc
gaactgaaagacaagttcgagaatatgggcgcacaaatggtgaaggaagtagccagcaag
acgtctgatgtcgcgggcgacggcacgaccactgccacggttctggcgcagtccatcgtc
aaggaaggcatgaagtatgtcgccgccgggatgaacccgatggacctgaagcgtggtatc
gataaagccgttgccgcaactgttgaggaactcaagaaactgtccaaaccctgtaccacc
ggcaaggaaattgcgcaggtgggaagcatatccgccaattcggatccggaaatcggcaag
atcattgcggacgcgatggaaaaagtgggtaaggaaggcgtgattacggtggaagatggt
tccgggctgcaaaatgagctggaggtggtcgagggcatgcagttcgaccgtggttatctt
tccccgtatttcataaacaatcccgacaggcagatcgcattgctggaaaatccttttgtc
ttgctgcacgacaagaagatttccaatatccgcgaattgctgccggtgctggagctcgta
gccaaagccggtaaaccgctattgatcattgctgaagatgtggacggcgaggcactcgcc
accctggttgtgaacaatatccgcggcatcctgaaaacctgtgcagtcaaagcgcctggc
tttggtgatcgccgcaaggccatgcttgaagacatcgccattctcacgggcggcacagtg
attgccgaagaagtaggtttatcgctggaaaaagctaccctgaaggagttgggacaggcc
aagcgcatagaagttggcaaggaagaaaccactgtcattgatggcgctggagatgccgca
aacattgaaggccgtgtcaagcaggtccgcaagcaaatcgacgaagccacgagcgactac
gacaaggaaaaattgcaggagcgtgtggcaaagctggctggcggtgtagcgttgatcaaa
gtcggtgcggccactgaagtggaaatgaaagagaagaaagcgcgtgttgaagacgccctg
catgctacccgcgccgcagtggaagaaggtatcgttcccggtggtggcgtggcgttattg
cgtaccttgagtgcggtggccagcctcaaaggcgacaatcatgatcaggacgccggcatc
aagattgttctgcgtgcgctggaagagcccctgcgccagatcgttgctaactgcggcgat
gagccttcggtagtaatcaacaaggtattggaaggcaagggtaattttggttacaatgcc
gccaccagcgaatatggcgacatggtggaaatgggtgttctggatcctaccaaggttacg
cgttatgcattgcagcatgccgcctccgtggcgagtctgatgcttaccactgatgctctg
gtggctgaatcaccaaaggaagaatccggtggaggcggtggcatgggcggcatgggtggt
atgggtggtatgggtggtatgggcggcatggatatgtag
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