Nitrosospira lacus: EBAPG3_000235
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Entry
EBAPG3_000235 CDS
T04907
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nlc03009
]
EBAPG3_000235 (der)
Ribosome biogenesis [BR:
nlc03009
]
Prokaryotic type
GTPases
EBAPG3_000235 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
AAA_22
ABC_tran
TniB
Roc
SRPRB
AAA_18
AAA_24
ATP_bind_1
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ARO86331
UniProt:
A0A1W6SKL1
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All DBs
Position
complement(54245..55645)
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AA seq
466 aa
AA seq
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MKPTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPGLTRDRHYGHGRLGDKPYLVVDTGGF
EPMVKEGILHEMAKQTRQAVDEADRVLFIVDGRTGLAPHDKVIAEQLRKTGRKIMLVVNK
TEGMASSVVTAEFHQLGLGEPCAISAAHGDNVNELVELALADFPLPQAEEKEDRHPKIAI
VGRPNVGKSTLVNALLGEERVIAFDQPGTTRDSIYIDFHRNGRPYTLIDTAGLRRRGKVF
ETVEKFSVVKTLQSVEDANVVVLVLDAGNEISDQDAHIAGFILETGRALVVAVNKWDGLD
NYQRDTIKNDIARKLSFLLNFAKLHYISALRGSGMKGLLPSIDAAYAAAMANLSTPRLTR
TLLAAVEKQQPPRAGLSRPKLRYAHQGGSNPPLIVIHGSALDKVPETYQRYLENTFREAF
QLEGTPLRVVFRSGHNPYAEKGAAPLSEAEAKRAHRRRMVGRKKYG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaccctcgtactggtcgggcggcccaatgtcggcaaatcaacactttttaac
cgcctgacccgcagccgtgacgcaattgtggcggatattcccggattgacgcgggatcgc
cattacggccatggcaggctgggcgataagccttatctggtggtcgacaccggtggcttc
gagccaatggtgaaggaaggcattttgcatgagatggccaagcagactcgacaagcggtg
gacgaagcggacagggtgctgttcatcgtcgatggcagaaccggtttggcgccgcatgat
aaggtaattgcggagcaactgcgcaagaccggacgaaaaatcatgctggtggtgaataaa
accgaaggcatggcgtcctccgtcgttactgcagaatttcaccaactgggcctgggggaa
ccctgcgcgatctccgccgcgcacggcgacaatgtgaatgagctggtggagttggcgcta
gcggatttccctctgccgcaagcagaagaaaaagaagacaggcatccaaaaattgccatc
gtgggacgccccaatgttggcaaatccacgctggtgaatgcactgctgggcgaggaacgc
gtcatcgcgtttgatcagccgggtaccacccgcgacagtatctatattgactttcatcgc
aacggccgtccgtacacgctgatcgataccgccggtttgcgccggcgtggcaaggtattt
gaaaccgtggaaaaattctcggtggtaaagaccttgcagtcggtggaagacgccaacgtg
gtggtcctggtactggacgcgggaaacgaaatttccgatcaggatgcccacatcgccggg
ttcatcctggaaacggggcgcgcactggtggtggcggttaacaaatgggatggcctggat
aattatcagcgcgataccatcaagaacgatatcgcccgcaaactctctttcttgctgaat
ttcgcgaaactccactatatctcggcattgcgaggcagtggcatgaaaggattgcttccg
tcgattgatgccgcttatgcggccgcgatggcgaatctatccaccccccggcttacccgc
accctgctggcggcggtagagaagcagcagcctccgcgtgctggcctgtcacgccccaaa
ctgcgctatgcccatcagggcggctccaacccgccattgatcgtaatccatggcagtgct
ctggataaggttcccgaaacctatcagcgttatctcgaaaacaccttccgcgaggccttt
cagctggaaggtacgccattgagagttgtgttccggtcgggtcacaatccctatgccgaa
aaaggtgcagcacctctcagcgaagcggaagcaaaacgtgcccatcgccgccgcatggtc
ggaaggaagaaatatggttga
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