Nitrosospira lacus: EBAPG3_001980
Help
Entry
EBAPG3_001980 CDS
T04907
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlc03000
]
EBAPG3_001980
Transcription factors [BR:
nlc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EBAPG3_001980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ARO86644
UniProt:
A0A1W6SLI0
LinkDB
All DBs
Position
446287..447267
Genome browser
AA seq
326 aa
AA seq
DB search
MRHSTLRQLEVFETIARLGSFTRAAEELFLTQPTVSMQIKKLTDAVGLTLFEQVGKKMYL
TDAGRELHQTCRDIFERLAQFEMVASDMKGLKAGKLRLAVVTTAKYFAPRLLGMFCQQYP
GVEVSLKVSNRERVLERLADNQDDLYILGQPPEEVDAVAQAFLENPLVVLAPVNHPLANK
KRIPLKRIAEEPFLSREPGSGTRIATERIFSEQGLKLKIRMELGSNEAIKQAIIGGLGIS
VLSRHTLALDAPMGQLAVLDVQGFPIDRQWYYAYPSGKQLSIVAQAFLSYLQQAPQFLVE
VSCNTRPSDTELPGFVEAPTSERMEP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatagcaccttgcgtcaacttgaagttttcgaaaccattgcccgtctgggaagt
tttacacgcgccgcagaagagctattcttgactcaacccacggtatcgatgcaaatcaaa
aaattaactgatgcagtcggtttgacgctgttcgagcaagttggcaaaaaaatgtatctc
accgatgccggacgcgagttgcatcaaacctgccgcgacattttcgaacgcctcgcgcag
ttcgagatggttgcgtcggacatgaaagggctgaaggctggcaaactgcggcttgcggtg
gtgactaccgcaaaatatttcgcaccgcgcttgcttggcatgttttgccagcaatatccg
ggcgtcgaggtctcgctcaaagtatccaaccgtgagcgtgtattggaacgcttggcagac
aatcaggacgatctttatatcctaggtcagccgccggaggaagtggatgcggtggcacag
gcgttcctggagaatccgctggtcgtgcttgcacccgtcaatcatccgcttgccaataag
aaaagaatcccgcttaagcgtatagccgaagagccatttttgtcgcgtgagccaggttcc
ggcacgcgcattgcgactgagcgtatcttttctgaacagggcttgaaattgaaaatccga
atggagttaggaagtaatgaggccatcaagcaggctattattggaggcttgggcatatca
gtcttgtcacgccacaccttggcgctggatgcgcccatgggacaactagctgtgcttgat
gtgcagggtttccctattgatcgccagtggtactacgcctacccatcaggaaaacagttg
tctattgtggcgcaggcatttttgagttacttacagcaagcaccgcagtttttggttgaa
gtatcttgcaatacgcgaccatcagacactgaactgcccggtttcgtggaggctccaaca
tctgagagaatggagccataa
DBGET
integrated database retrieval system
