Nitrosospira lacus: EBAPG3_002355
Help
Entry
EBAPG3_002355 CDS
T04907
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00061
Fatty acid biosynthesis
nlc00071
Fatty acid degradation
nlc01100
Metabolic pathways
nlc01212
Fatty acid metabolism
nlc02024
Quorum sensing
nlc04146
Peroxisome
Module
nlc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EBAPG3_002355
00071 Fatty acid degradation
EBAPG3_002355
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EBAPG3_002355
09145 Cellular community - prokaryotes
02024 Quorum sensing
EBAPG3_002355
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nlc01004
]
EBAPG3_002355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlc04147
]
EBAPG3_002355
Enzymes [BR:
nlc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EBAPG3_002355
Lipid biosynthesis proteins [BR:
nlc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EBAPG3_002355
Exosome [BR:
nlc04147
]
Exosomal proteins
Exosomal proteins of breast milk
EBAPG3_002355
Exosomal proteins of breast cancer cells
EBAPG3_002355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF4170
Motif
Other DBs
NCBI-ProteinID:
ARO86706
UniProt:
A0A1W6SLM3
LinkDB
All DBs
Position
522133..523950
Genome browser
AA seq
605 aa
AA seq
DB search
MQNRQHDLTNIIPVEVAGTLDGLFSERARRSPEGVAYRDYDRSSGKWRDLTWEQMDHGIM
RWQTALSRENLVTGDRVAVMLRNCPEWVMFEHAALRMGLVVVPLYTADRPENAAYILSDA
GVKVLLLEEVAQWRTFSGLSHPIGNLMRVVTIQSSPEKIEDSRVLALHDWLPGQAGEMQH
VKADPHQLATIIYTSGTSGRPKGVMLSHHNILTNAYGCSQIVPLSRNDLLLSFLPLSHAF
ERTAGYYVPMMCGAAVAYARSIQQLPEDLLIIRPTILVSVPRIYERVYAGIRTKLVEGSA
LSRKLFKLAVDIGFSRFEYQQRRGSWRLSYLLWPLLDNLVAKKVMAKLGGRLRGAMSGGA
ALSADVSRVFIGLGLPLLQGYGMTESSPVVCSNTFDNNVPGSVGRPIPGVEVKLGESAAL
LIRGPNVMLGYWNDPEATKAVLTPDGWLNSGDIARIDENGGITITGRLKEIIVMSTGEKV
PPADMEAAILRDPLFEHVMLIGEGRSYLSALVGLNPGHWESLSGQYQLDRDWRNLGQDPK
LEEILLERIAHQISEFPGYAKVYRIALAQEPWTIENGMLTPTLKLRRSRVLDRYKGEVAR
LYEGH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaggcagcatgacctgacgaacattatcccggtggaggtagccggaacactg
gacggcctgttcagtgagagagctcgccggtctcccgaaggagtggcttaccgggattac
gaccggtcgagcggcaaatggcgcgatctcacctgggaacagatggatcacgggattatg
cgctggcaaaccgccctctcccgggagaatcttgtgaccggcgacagggtggcggtgatg
ttaagaaactgccccgaatgggtgatgttcgaacatgccgcgctgagaatggggttggtg
gtcgtgcctctctatacggccgatcgcccggaaaatgcagcctatattctatccgacgct
ggcgttaaggtattgttgctggaagaggttgcgcagtggcggacattttccggcttgagc
catccgattggcaatctgatgcgcgtcgtgacgattcagagcagccctgaaaaaattgag
gacagtcgcgtgcttgcgctgcatgactggctgcccgggcaagccggagagatgcagcat
gtcaaagccgatccgcatcaactggccaccattatatacacctccggcacttcaggccgg
cccaagggagtgatgctgagtcatcacaatatacttacgaacgcctatggctgctctcag
attgtgccgctgtcgcggaatgatctgctgctctcgtttcttcccctgtcgcatgccttc
gagcgcacggccggctattatgtccccatgatgtgcggagccgcggtggcctatgcccgc
tcgattcaacagttgccggaggacttgctgatcattcgtcccactatcctggtttcggta
ccccgaatctatgagcgcgtgtacgcaggaattcgcaccaagctcgtggaaggatccgcc
ctcagccgtaagctgtttaagctggcggttgatattggtttcagccgcttcgaatatcag
cagcgccgcggttcctggcgtctttcctacctgttatggccgttgctggacaacctggtg
gcaaagaaggtgatggccaaactgggtgggaggcttcgcggggcgatgagtggcggggcg
gcgttatcggctgacgtttcgcgggtatttatcggtctgggactgccgctgctgcaaggc
tacggcatgaccgaaagcagtcccgtggtatgcagcaacacctttgataacaatgtccca
gggagcgtggggcgacccatcccgggtgtggaagtaaaacttggcgagagcgctgcgctg
ctgattcgcggccccaatgtgatgctgggttactggaatgatccggaagccaccaaggct
gtgctgacacctgacggctggctgaattccggcgacatcgcgcgcattgatgaaaacggc
gggataacgatcaccgggcgcctgaaggaaatcatcgtcatgtccaccggtgaaaaggtg
ccacccgcggatatggaagccgcgattctgcgcgatccattattcgagcacgtgatgctg
atcggggaaggacgctcatacttgagtgcactggtgggcctgaatcccggccactgggaa
agcctgtcagggcaatatcaacttgatcgtgactggcgcaacctggggcaagacccgaaa
cttgaggaaatcctgctggaaaggatcgctcatcagataagcgagtttcccggctacgcc
aaggtgtaccgcatagcgctggcacaagaaccatggaccatcgagaacggcatgctcacg
cccaccttgaaattgcggcgaagtcgggtccttgatcgttataagggtgaagtggccagg
ctctacgaggggcattaa
DBGET
integrated database retrieval system
