Nitrosospira lacus: EBAPG3_002580
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Entry
EBAPG3_002580 CDS
T04907
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlc03016
]
EBAPG3_002580
Transfer RNA biogenesis [BR:
nlc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EBAPG3_002580
Prokaryotic type
Methyltransferases
EBAPG3_002580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
Ras
Roc
AAA_16
AIG1
Hpr_kinase_C
MCM
Arf
Guanylate_kin
AAA_28
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ARO86746
UniProt:
A0A1W6SLS2
LinkDB
All DBs
Position
567790..569139
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AA seq
449 aa
AA seq
DB search
MGSTDLIAAIATPPGRGGIGVVRVSGKNLSPLIIKIINHIPMPRYASLSRFLDEDGSIID
QGIALYFPSPHSYTGEDVLELQGHGGPAVMNLLLSRCLSAGARLAQPGEFTLRAFLNGKL
DLAQAESVADVIDASTGEAARCAMRSLQGEFSRVIDDLVQALTDLRMVVEATLDFPEEET
VVLPQADVCSKLAAIQSQLDDVLTAARQGSLLREGVGVVLVGQPNVGKSSLMNQLAGEET
AIVTEIPGTTRDAIHEMVEIEGVPFHLIDTAGLRETDDPVEKAGIARTRAAIGKADLALL
LVDCRWGVVPEDRAIVDSLPPKLPLILVSNKIDLLAKVPQIESGEDGPLIYLSAKTGAGI
DLLRRKLLEMAGWHSEAEGIFMARHRHVEALRESGEYLRNALELSRQEAQLDLLAEELRA
AQQMLSSITGEFSADDLLGEIFSRFCIGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtacggacctcattgcggccattgccacaccccccgggcggggtggcattggt
gtagtgcgggtttccggtaagaatctatctcccctgataataaagattatcaatcatatt
ccgatgccgcggtatgccagtctcagcaggtttctggatgaagatggatcgatcatagat
cagggcattgcgctctattttccgtccccacactcgtatacgggagaagacgtcctggag
ttgcagggtcacggcgggcctgcggtaatgaatttattgctctcccgttgtttgtccgcg
ggcgcccggctggcgcagccgggcgagtttaccttgcgcgcgtttcttaatggaaaactg
gacctcgcacaggcagaaagcgtcgccgacgttatagatgccagtactggcgaggccgcg
cgctgtgccatgcgttcgctgcaaggggagttttcccgggtcatagatgatctggtgcaa
gcgcttactgacctgcggatggtggtggaggccacgctggatttcccggaggaagagacg
gttgttctgccgcaggcggatgtttgcagcaagctggcggcgattcaatcccagcttgac
gatgtgctgacagccgccaggcaaggcagcctgctgcgcgaaggcgtaggcgtggttctg
gtcgggcagcccaatgtcggcaaatccagcttgatgaaccagttggccggggaggaaact
gcgattgtcaccgaaatcccgggcaccactcgcgatgctatccatgaaatggttgaaata
gagggtgttccgtttcatctgatcgataccgccggattgcgggaaactgatgatccggtc
gagaaagcaggcatcgcccgtacgcgcgcagcgataggaaaagcggatctggcattattg
ctggttgactgccggtggggagttgtgccggaagatcgagcgatagtcgacagccttccg
cccaaattgccgttgatcctggtgagtaacaaaatagatttgctggcgaaggtcccgcaa
atcgagagcggcgaagacggaccgttgatttacctctcggctaaaaccggtgccggaatt
gatttgcttcgccgaaaactgctggaaatggctggctggcattcggaggcggaaggcata
ttcatggcgcgtcaccgccatgttgaggcgctgagggaatcaggggaatatctgcggaat
gcattggagctgtccagacaggaggcccaactggatttgctggcggaagagctgagggct
gcgcagcagatgttgtcgtccatcaccggcgaattcagtgccgatgacttgctgggagaa
atattttcccgcttttgtataggtaaatag
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