Nitrosospira lacus: EBAPG3_002745
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Entry
EBAPG3_002745 CDS
T04907
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlc03021
]
EBAPG3_002745 (rpoH)
Transcription machinery [BR:
nlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EBAPG3_002745 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
HTH_31
UCR_14kD
KORA
Motif
Other DBs
NCBI-ProteinID:
ARO86773
UniProt:
A0A1W6SLU5
LinkDB
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Position
complement(603516..604361)
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AA seq
281 aa
AA seq
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MTFALAIPSAGGSIESYIQSVNRFRILSQEEEIRLARSLRDEDNIDAARQLVLSHLRVVV
AIARGYKGYGLPQADLIQEGNIGLMKAVKRYDPERGVRLVSFAVHWIKAEIHEFILRNWR
LVKIATTKAQRKLFFNLRSMKPVLDTMNPAEVNTMAKQLGVKAEEVVEMETRFNGRDISL
EPLSEDDDDTFSPVAYLTDGSEPPQLLEAEQTRRLRGEGLERALASLDARSRHIIEARWL
RENDSATLHDLAGELGVSAERIRQIEAKAMEKMRGAMVAVA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgctttagccataccttccgctggcggcagcattgaaagttacattcaatct
gttaatcgctttcgcattctttctcaggaagaagaaatccgtctggcacgatccctgaga
gatgaggacaatatagacgcggcccgtcaattggttttatcgcacttgcgcgtggtggtt
gccattgctcgcggttacaaaggctacggtctgccccaggcggatctgatccaggagggc
aacatcggtctcatgaaagcggtcaaacgctatgaccctgagcgtggcgtacggctggta
tcgttcgcggtgcactggatcaaggcggaaattcacgaattcatactgcgcaactggcga
ctggtaaaaatcgccacaacgaaggcacagcggaaattgttctttaacctgcgcagcatg
aagccggttctggataccatgaatcctgcggaagttaacaccatggccaaacagttaggc
gtcaaggccgaggaagtggtagaaatggaaacccgtttcaacgggcgcgatatctcgctg
gaaccactatctgaagacgatgacgatacattcagtcccgtcgcttatcttaccgatggc
tcggaaccgccacaattgctggaggccgaacaaaccaggcgtttgcgtggggaagggctg
gagcgggcgctggcaagcctggatgcacgtagccggcacatcatcgaggcgcgctggctg
cgtgaaaacgatagcgcaacgctgcatgatcttgccggtgaattgggcgtatctgccgag
cggatacgccagatcgaagccaaggcaatggagaaaatgcggggggcgatggtagcggtt
gcataa
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