Nitrosospira lacus: EBAPG3_002795
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Entry
EBAPG3_002795 CDS
T04907
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03030
DNA replication
nlc03430
Mismatch repair
nlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBAPG3_002795
03430 Mismatch repair
EBAPG3_002795
03440 Homologous recombination
EBAPG3_002795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlc03032
]
EBAPG3_002795
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_002795
Enzymes [BR:
nlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBAPG3_002795
DNA replication proteins [BR:
nlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EBAPG3_002795
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EBAPG3_002795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
APOBEC3
SSB
Motif
Other DBs
NCBI-ProteinID:
ARO86783
UniProt:
A0A1W6SLV4
LinkDB
All DBs
Position
complement(612577..616131)
Genome browser
AA seq
1184 aa
AA seq
DB search
MSTSPTFVHLRMHSEYSIVDGIVRIDDAVAKAASDGMPALSLTDLSNLFGMVKFYQEARA
KGIKPIIGCDVWISNEDDRNKPARILLLCQSNSGYLLLCQLLSRAYRENQRQGRAEIRKS
WLAESQTGTAGLIALSGADLGDIGLMLMQNNLIQAEMLARGWADLFPNRFYIEVQRVGHP
NTETLVQNSLALASALHLPVVATQSVQFLNPDDYKAHEARVCIAEGYVLGDRRRPKHCTE
EQYFKTQAEMAALFADIPAALANTVELAKRCNLALELGVNRLPLFPTPNNQSLELYLRAQ
AETGLEERMQALYPDRTERNAQMPKYRARLDFEASTIVQMGFAGYFLIVADFINWAKHNG
VPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERVSMPDFDIDFCQDGREHVI
DYVKQKYGAESVSQIATFGTMAAKAVVRDVGRVLDLPYNFVDQLAKLVPFDLGMTLKKAR
AEEPQLNQRAQAEEEVRNLLELAERLEGLTRNVGMHAGGVLIASGKITDFCPVYCTDSGN
SVISQLDKDDVEKIGLVKFDFLGLRTLTILDWTVRYIRQGNAPPGVQGSGRTVPSADGNI
AETGIGSMQSFSLENLPLDDPATYALLRQGNAVGVFQFESRGMKDLLQKAKPDCFEDIIA
LVALYRPGPMALIPEFTERKHGKRVEYLDPRLQPILEPTYGVMIYQEQVMQIAQVIGGYS
LGSADLLRRAMGKKKVEEMAMQRDIFVAGATRNGLTERDATELFSLMEKFAGYGFNKSHA
AAYALIAFQTAYLKAHYPAEFLAATLSADMDDTDKVHAFFEDGIANGLTILPPDINLSGH
RFIPVEEKTIRYGLGAVKGTGESAIAAIIKARDQGGTYTDLFDFCQRVDKRIVNRRVVES
LIRAGAFDSVNSHRAGLLASVGIALESAEQAGRAVNQVSLFGEGDDSMEQQSLINVPQWV
EKDKLKNEKMALGFYLSGHPFNACAEELKDFVRTRLNRLNPQREPQLLAGIVYAVRTQMT
RRGKMGVIVLDDASARVEIVVYNELFESARSWLKEDQLLLVEARVNSKRGDDGNGDELRI
SADQLYNLDSARSRYAKCMKLHCNGLSNAAKLKELLAPYRINANTVNAGNSQHGDGYCPV
SVIYRNKDAVCELKLGDAWRVSLQDNLLQSLSAHFKAENVKVIY
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcccccacctttgtccacctgcgcatgcacagcgagtattccatcgtggat
ggcattgtgcgtatcgacgacgcggtggcaaaagcggcgtccgacggtatgccggcattg
tcgcttacggatctttccaacttgttcggcatggtgaagttttatcaggaggcgcgagcc
aaaggcataaaaccgatcatcggctgcgatgtctggataagcaacgaagatgaccggaac
aaacccgcgcgtattttattgttgtgccagtccaactcgggctatctcttattgtgccag
ctgctgtcccgcgcctatcgcgaaaaccagcgccagggacgggcagaaatcagaaaatcc
tggcttgccgagagccaaacggggacggcgggactgattgccctgtccggggcagacctt
ggcgatattggcctgatgttgatgcagaataatttgattcaggcggaaatgctcgcgcga
gggtgggcggatttgttcccaaaccgtttttacatcgaggtacagcgggtagggcacccc
aataccgagacgctcgtgcagaactcactggcgctggcatccgcattgcatctgccggta
gtggcaacccaatcggtacagtttctaaatcccgacgattacaaggcgcatgaagcgagg
gtgtgcatcgccgaaggttacgtgctgggtgaccgccgccgcccaaagcattgcactgaa
gagcagtatttcaagacccaggcggaaatggcggcattgttcgctgacataccggcggca
ctcgccaacaccgtggaactcgccaagcgctgtaatctcgccctggagttgggagtcaat
cgcctcccattatttccgacgcccaacaaccagagcctggagctgtatttgcgcgcccaa
gcggaaaccggcctcgaagagcgcatgcaagctctttatcccgatagaactgagcgcaat
gcgcaaatgcccaaatatcgcgcgcggctggatttcgaggcatccaccatcgtgcagatg
gggttcgcgggctacttcctgatcgttgccgatttcatcaactgggccaagcacaatggt
gtgcctgtcggccctggccgaggctccggtgcgggttcgctggtcgcttattcccttggc
attaccgacctcgatccgcttcgttacgatttactgtttgaacgcttccttaatccggaa
cgtgtttccatgcctgattttgacatcgatttctgtcaggatgggcgcgaacatgtcata
gattatgtcaaacagaagtatggcgccgagagtgtttcgcagattgccacatttggcacc
atggcggcaaaagcggtagtgcgcgatgtcgggcgggtgctggatctgccttataacttc
gtcgatcagttggcgaagctggtaccgtttgatcttggcatgacgttgaaaaaggcgcgt
gcggaagagccacaactgaaccaacgcgcgcaggcagaagaagaggtgcgtaatctgctg
gaactggccgaacgcctcgaagggcttacacgcaatgtaggcatgcatgccgggggcgtc
ctgatcgcatcgggaaagattactgatttttgccccgtttactgcacagactcgggtaat
tcggtaataagccagctggacaaagatgatgttgagaaaatcggcctggtgaagttcgac
ttcctcgggttgcggacgttgactatcctcgactggaccgtcagatacatcaggcaggga
aatgcgccccccggcgtacaggggtccgggcgcaccgtaccgagtgccgatgggaacatt
gctgaaaccggaattggaagcatgcaatccttttccctggagaacctccctctggatgat
ccggccacctacgcgctgttgcggcagggaaacgccgtaggggtattccagttcgaatcg
cgcggcatgaaagatctgttgcagaaagcaaagcccgactgttttgaggacatcatcgcg
ctggtggcgctgtaccgtccgggaccgatggccctgattcccgaatttaccgagcgcaag
catggcaagcgcgtggagtatctcgatccgcgtttgcaacccatacttgagcccacatat
ggcgtgatgatttaccaggaacaggtcatgcaaatcgcgcaggtgataggcggctacagt
ctagggagtgccgatctgctgcggcgggcaatgggtaagaaaaaagtcgaagaaatggcc
atgcagcgcgatattttcgttgccggcgccaccaggaatggtttgacagagcgcgatgcg
accgaactgttcagcctgatggaaaaatttgcgggctatggtttcaacaagtcgcatgcg
gcggcttatgccttgattgcatttcagaccgcctacctcaaggcacattatcccgctgaa
ttcctggccgccacactgtccgccgatatggacgatacggacaaggtgcatgcttttttt
gaggatggcattgccaatgggctcaccatcctgccccccgacatcaatctttccggtcac
cgtttcattcctgtggaggaaaaaaccatacgatatggtctgggagcggtaaaagggacg
ggcgaatcggcaatcgctgcaattatcaaggcgcgcgatcagggtgggacctacactgat
ttgttcgatttttgccagcgggtggacaagcgcattgtcaaccgccgcgtggtggaatca
ctcatccgcgctggcgcatttgattctgtcaatagccatcgggcgggcttgctggcatcg
gtcggcattgccctcgaatcggccgaacaggccggccgtgcggtcaaccaggtgagttta
tttggtgagggtgacgattcgatggaacagcagagtttgatcaatgtgccgcagtgggtg
gagaaggataagctgaagaatgaaaaaatggcgctgggattctatttgagcggccaccca
ttcaatgcctgtgcggaagaactgaaagactttgtacgcacgcggctgaatcggttgaat
ccccagcgagaaccgcaacttctggcaggaatcgtctatgccgtacgcactcaaatgacc
cggcgtggcaagatgggggtgatcgtattggatgacgccagtgcgcgggtggagatagtt
gtgtacaacgagttattcgagtctgcccgtagttggctgaaagaagatcaactgcttttg
gtagaagccagggtgaacagtaaaaggggtgacgacgggaatggcgatgaactgcgtatt
tccgccgatcagctctataatctggacagtgcccgctcgcgctacgcaaaatgcatgaag
ctccactgcaatggcctgtcgaacgcggccaagctaaaggaattacttgcaccctatcgt
atcaacgctaataccgtcaacgccggcaatagtcaacatggcgatgggtactgtccggta
tcggtgatttatcgcaataaggatgcggtttgcgaactgaaactgggagatgcctggcgc
gtaagcctgcaggacaatttgctgcaatccttgtcagcgcatttcaaggcggaaaatgtc
aaggtgatttactga
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integrated database retrieval system
