Nitrosospira lacus: EBAPG3_004465
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Entry
EBAPG3_004465 CDS
T04907
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EBAPG3_004465
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nlc01007
]
EBAPG3_004465
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlc03016
]
EBAPG3_004465
Enzymes [BR:
nlc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
EBAPG3_004465
Amino acid related enzymes [BR:
nlc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
EBAPG3_004465
Transfer RNA biogenesis [BR:
nlc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EBAPG3_004465
Prokaryotic type
EBAPG3_004465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ARO87086
UniProt:
A0A1W6SMS2
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All DBs
Position
1006285..1008669
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AA seq
794 aa
AA seq
DB search
MKFSENWLRTFVNPPLSTRELAQALTMAGLEVEAAEPVAPVFHKVVVAEVLSVEKHPDAD
HLNVCQVNAGPAASNQPLQIVCGAMNVRAGIKVPCALVGAQLPGVVIKQARIRGVESTGM
LCSARELGLEETGPGLLLLPGDAPAGVDFRDYYELDDTLITLKLTPNRADCLGLSGIARE
VAAITSEILNPLEIEPVQDRIAESLAVYVDAPDACPLYCGRVVREISLDVPTPQWMIRRL
ERSGIRTINAVVDVTNYVMLETGQPLHAFDLTRIEGGHAGTGAIHVRYAGSGETLQLLNG
EGLVLQPDMLVIADEAKPLALAGIMGGNESGVQQGTTGLFLESAFFSQEVIAGKSFRLGF
SSDSAHRFERGVDFAATRDAMERATSLVLDICGGRAGPINEVRGKLPSRNPIDLRLERSR
RVLGITLDETTAAAILRRLQFNFSTTAGVFRVVPPTYRFDLAIEEDLIEELARIYGYNHI
PAAFPHADLRMLPAPESMHAPAQLRQILIGRDYQEVINYAFVDASWELELSGEEAPVALR
NPLSSQMDVMRSSLLGGLISNLQFNLNRKQARVRLFEIGCCFLKKGETYAQPEKLAGLSY
GDAMAEQWGISARGVDFYDAKADIEALFWPALPHFEVASHPTLHPGKSARIRLGERIAGY
VGELHPRWRQKLGLPDSAVLFELDLDILLTRKLPMAAEISKFPLIRRDIAVVVAEEVAAQ
ALLDGMKAEKSPMILEISLFDVYRGKGMENGKKSLAFRVLLQDTQKTLTDAEVDLVMTKL
INILENQFGARLRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcagaaaattggcttcgtaccttcgttaatccgccattatctactcgcgaa
ctcgcccaagcactgaccatggcgggtctggaagtggaagccgccgagcctgtcgccccg
gtcttccacaaggtggtggtggccgaagttctgtcagtggaaaaacatccggatgccgat
catctcaatgtttgccaagtgaacgcgggtcccgccgcgagtaaccagccgctacaaatc
gtctgtggtgcgatgaatgttcgcgccggaataaaagtgccatgtgccttggtcggtgcg
caactgcccggggttgtcatcaaacaggcgaggatacggggagtcgaatccacgggcatg
ttgtgttcagccagggaactcggtttggaagaaaccgggccgggtttattgctgttgcct
ggtgatgcgccagcgggtgtggactttcgcgattattacgagctcgatgatacccttatt
acactcaagctgacacccaaccgtgccgattgcctcggactatccggaatagcgcgggaa
gtcgcggcgattacttccgaaattcttaacccgcttgaaatcgaaccggttcaggatcgg
attgccgaaagtctggcagtatacgtggatgcgccggacgcctgcccactttactgtggc
cgggtggtacgtgaaatatccctcgacgttcccacgccccaatggatgattcgccgcctg
gagcgtagcgggatacgcacgatcaacgcggtggtggacgtgaccaactatgtcatgctg
gaaaccggtcaaccgcttcatgccttcgacctgacccggattgagggcgggcatgcgggt
acgggtgcaatccatgtacgctatgccggatctggcgaaacgctccaattgctgaatggt
gagggcctcgttttgcaacccgacatgctcgtgatcgccgatgaggccaagccgctggcg
ctcgcgggtatcatgggggggaatgaaagtggcgtgcagcaaggcacaaccggcctgttt
ctggagagtgcatttttcagtcaggaggtgatcgccggtaaatcattccgcctgggtttc
agttccgactccgctcaccgttttgagcgcggtgtggattttgccgccacgcgcgatgcg
atggaacgcgccacgagcctggtgctcgatatttgcggcggcagggcgggcccgattaac
gaggtcaggggtaaattgccgtcacgcaatccgattgatctgcggttggaacggtcgcga
agagtgctgggtataacgcttgatgagaccacggccgccgcaatactacggcgcctgcaa
ttcaatttttccactacagccggtgtgttccgtgtagtgccaccgacttaccgtttcgat
ctcgccatagaagaagacctgattgaagaattggcgcgcatttacggatataaccatatc
ccggcagcctttccccatgcggatctgcgcatgctgcccgcacctgaatccatgcacgca
ccggcacaattgcggcagattctgataggacgagactaccaggaagtcatcaactatgcc
ttcgtggatgcttcatgggaattggagctgtcgggggaggaagcgccggtggcattgaga
aatccgctatccagccagatggatgtgatgcgtagcagcctgcttggcggccttatatcg
aacttgcaattcaatcttaatcgcaaacaagccagagtgcggctgttcgagatcggatgt
tgtttcctgaaaaaaggtgagacttacgcacagccggagaaactggccggactcagctat
ggagacgccatggccgagcagtggggaatctccgctcgcggagtggatttttatgacgcg
aaggcggatatcgaagcattattctggccggcactgcctcattttgaagtggcttctcat
cccactctgcatcccggtaagtcggcccgaatccgtttgggtgaaagaatcgccggctat
gtcggagagcttcatccccgttggcggcaaaaacttggtttgcctgattctgcggtactg
ttcgaattggatctggacatcttgctgacaagaaagctgccgatggctgcggagatatca
aaatttccgctgatacgacgcgatatcgctgtggtggtggcggaggaggttgccgcgcag
gcgctgttggatggtatgaaagcggaaaaatcacccatgattctggaaatttccctgttc
gatgtgtatcgtggaaaggggatggaaaatggcaaaaaaagtcttgcattccgtgtgtta
ttgcaagatactcaaaaaacactaactgacgcggaagtggacctggttatgacaaagttg
ataaatattctggaaaatcagtttggcgccagactgcgtaattga
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