Nitrosospira lacus: EBAPG3_004765
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Entry
EBAPG3_004765 CDS
T04907
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00010
Glycolysis / Gluconeogenesis
nlc00020
Citrate cycle (TCA cycle)
nlc00260
Glycine, serine and threonine metabolism
nlc00280
Valine, leucine and isoleucine degradation
nlc00310
Lysine degradation
nlc00380
Tryptophan metabolism
nlc00620
Pyruvate metabolism
nlc00630
Glyoxylate and dicarboxylate metabolism
nlc00640
Propanoate metabolism
nlc00670
One carbon pool by folate
nlc00785
Lipoic acid metabolism
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
nlc01120
Microbial metabolism in diverse environments
nlc01200
Carbon metabolism
nlc01210
2-Oxocarboxylic acid metabolism
nlc01240
Biosynthesis of cofactors
Module
nlc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nlc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nlc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nlc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EBAPG3_004765 (lpdA)
00020 Citrate cycle (TCA cycle)
EBAPG3_004765 (lpdA)
00620 Pyruvate metabolism
EBAPG3_004765 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EBAPG3_004765 (lpdA)
00640 Propanoate metabolism
EBAPG3_004765 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EBAPG3_004765 (lpdA)
00280 Valine, leucine and isoleucine degradation
EBAPG3_004765 (lpdA)
00310 Lysine degradation
EBAPG3_004765 (lpdA)
00380 Tryptophan metabolism
EBAPG3_004765 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EBAPG3_004765 (lpdA)
00670 One carbon pool by folate
EBAPG3_004765 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlc04147
]
EBAPG3_004765 (lpdA)
Enzymes [BR:
nlc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EBAPG3_004765 (lpdA)
Exosome [BR:
nlc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EBAPG3_004765 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Pyr_redox_3
AlaDh_PNT_C
NAD_binding_8
GIDA
Biotin_lipoyl_2
FAD_binding_2
HI0933_like
Thi4
GCV_H
FAD_binding_3
RnfC_N
DAO
NQRA_N
HlyD_D23
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ARO87135
UniProt:
A0A1W6SMX0
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All DBs
Position
1081846..1083636
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AA seq
596 aa
AA seq
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MTQLIEIKIPDIGDFTDVPVIELLVKPGDTVEKETSLITLETDKATMEIPAPQAGTVKEV
KVKIGDKVSEGTIILVLETAAKPAEPVKAPVSSSVPALESPAGVASAPAPVKPSPDIPQG
DIHADIVVLGAGPGGYTAAFRAADLGKKVVLIERYPALGGVCLNVGCIPSKALLHVAKVI
TEAEETERQGIVFGKPAIELNKLRTWKESVVGKLTKGLAGLAKQRKVRVVQGKGTFTSPN
MIQMETSDGLKTVSFESCIIAAGSSVARIPGFPYDDPRLMDSTGALKLDDIPQRMLIIGG
GIIGLEMATVYDALGCKISVVELMDQLIPGADADLVKPLYRRIQKRYEAIYLKTRVTRIE
AQEDGLSVTFESASDAVPAPEPQLYDRILMAVGRRPNGRDIGVGSAGVTVDERGYIPVNK
QLRTNVPHIFAIGDICGEPMLAHKASHEGKLAAEIIAGGEHTKEAAFDARAIPSVAYTDP
EIAWMGLTETEAGKQGIEYERAVFPWAASGRAIAMARDEGLTKLLLDKKTRRILGAGIVG
VNAGELIAETVLGLEMGADMEDIGLTIHPHPTLSETVFFAAEIAEGSITDLYMPKK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgactcagttgatcgaaataaaaatccctgatatcggagatttcacggatgttcccgtt
atcgaactgctggtgaagccgggtgatacggtggaaaaggaaacatcgcttatcacgctg
gaaaccgacaaggcgacgatggagattcccgcgcctcaagctggcacggtaaaggaggtc
aaggtcaagatcggcgataaggtttcggaggggacgatcatacttgtgctggaaacagca
gcgaaaccggctgagccggttaaagcgcccgtttcatcatctgtacctgctctcgagtcc
cctgcgggggtggcttcagcacctgcgccggttaagccctctcctgatattccgcagggt
gatattcatgccgatatcgtggtactcggtgcggggccgggcggttacacggctgcattt
cgcgccgccgacctgggcaagaaggtggtcctgatcgagcgttaccccgcccttggcggt
gtgtgcctcaatgtcggctgtattccctccaaggcactcctgcacgtggcgaaggtcatc
acggaggcggaggaaacggagcgtcaggggatcgttttcggcaagcccgccatagaactc
aataagctgcggacctggaaggaatccgtagtgggtaaactcaccaagggactggcaggg
ttggcgaagcagcgcaaggtgcgcgtggtacaaggaaagggcacattcacgtcacccaat
atgatccagatggagacatccgatggcctgaaaaccgtatctttcgagtcctgtatcatc
gctgcgggatccagcgtggcgcgtattcccggcttcccgtatgatgatccgcgactcatg
gattcgactggcgcgctgaaactggacgatattccgcagcgcatgctcatcattggcggg
ggcattatcggcctggaaatggcgaccgtttatgacgcgctcgggtgcaaaatcagtgtg
gtggagttgatggatcagttgatccccggcgcggacgcggatctcgtcaagccgttgtat
cggcgcatacagaaacgctacgaagcgatttacctgaaaaccagggttacccggatcgag
gcgcaagaggatggcttgagtgtcacattcgaaagcgcatccgatgctgttccggcacct
gaaccgcagctttatgatcgcattctaatggcagtggggcgtcgccccaatggccgcgat
atcggtgtgggaagtgccggggtcacagtggatgagcgcggctacatcccggtaaacaag
cagttgcgcaccaacgtgccgcacatattcgccattggcgatatttgcggcgagcctatg
ctggcgcacaaagcctcgcacgaaggcaagcttgccgcggaaatcatcgcgggtggggaa
cacacaaaagaggcggcattcgatgcacgcgccatcccgtcagtggcctacaccgatccg
gaaatcgcctggatgggcctgaccgaaaccgaagccggcaagcaaggcatcgagtacgaa
agagcagtgtttccctgggcagcgagcggccgcgcgatcgcaatggcgcgcgacgaaggg
ctgaccaaactgctgctggacaaaaagacccgccgtattcttggtgctggcatcgtgggg
gttaacgccggcgagctgatcgccgaaacggtgctggggcttgaaatgggcgcggatatg
gaagatattggtctcaccatccacccgcatcccaccctgtctgaaaccgtcttttttgcc
gccgaaattgcggaagggtcgattactgatctgtatatgccgaagaaatga
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