Nitrosospira lacus: EBAPG3_004860
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Entry
EBAPG3_004860 CDS
T04907
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00300
Lysine biosynthesis
nlc00470
D-Amino acid metabolism
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
nlc01120
Microbial metabolism in diverse environments
nlc01230
Biosynthesis of amino acids
Module
nlc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EBAPG3_004860 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EBAPG3_004860 (lysA)
Enzymes [BR:
nlc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EBAPG3_004860 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARO87152
UniProt:
A0A1W6SN16
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Position
complement(1106867..1108120)
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AA seq
417 aa
AA seq
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MSGFPSFDYRNGRLYGESVQLDRIAREFGTPCYVYSRAALVAAYREFDAAFGGRDHLVCY
AVKANSNLAILNLLARLGSGFDIVSGGELQRVLKAGGDPQKVVFSGVGKQPDEMRAALAA
GIFCFNVESEAELAVLDRVAGELNKIAPVSLRVNPDVDAKTHPYISTGLKENKFGVPFEE
AEKLYASAREFANLRISGLDCHIGSQLTKLGPFVEACGKILGLLIRLETLGFTIDHLDLG
GGLGIRYLGENPPAAKDYVTALCAAIGPRNQRILIEPGRALVGNAGVLLTRVEYLKHTPH
RDFAIVDAAMNDLMRPALYDAYHEILPVIANGGDEKIYQIVGPVCETGDFLGHDRKLALS
QGDLLAIMSAGAYGMSMSSNYNTRPRAAEVMVDGDHVHLIRQRESLEQLLAGEKMLP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggttttccttcatttgattatcgcaatgggaggctgtacggtgaatcggttcaa
ctggatcgcattgcccgcgaattcggcacgccctgctatgtttattcacgcgcggcgctc
gttgcggcttacagggaattcgacgccgcattcggcggacgcgaccatctggtgtgctat
gcagtcaaggctaactccaatctggctattctcaatttactcgcccgtctcggcagcggc
ttcgatattgtctccgggggagaactccagcgagtgctgaaagcgggcggtgatccgcaa
aaagtggtgttttcgggagtgggcaagcaaccggatgagatgcgggcggcgcttgctgcg
ggaatattctgtttcaacgtggaatcggaagcggaattggccgtgctggaccgggtggcg
ggtgagttgaataaaatcgcgccggtgagcctgcgggtcaatcccgatgtggacgcaaag
acgcacccttatatttccactggtctcaaggaaaacaaatttggtgtgcccttcgaagag
gcggagaagctttatgcctccgcacgcgaatttgccaacttgcgcatcagcggactggat
tgccatatcggctcacaattgaccaaactgggcccctttgtcgaagcttgcgggaaaata
cttggcctgttgattcgccttgaaacgctgggatttactatcgatcatctggatctgggc
ggcggtctcggcattcgctatttgggagaaaatccgcccgcggcgaaagactacgtcacg
gcattgtgtgccgcgatcggcccacgtaaccagcgcatccttatcgaacctggccgcgcg
ctggtgggcaacgccggtgtattgcttacgcgcgtcgagtatctcaaacataccccgcat
cgggatttcgccatcgtggatgccgccatgaatgacctgatgcgtccggcactctatgac
gcctaccatgaaatcctgccggttattgcgaatggcggcgatgagaaaatatatcagatt
gtcgggcccgtttgtgaaacaggcgattttttggggcatgaccggaagctggcattgtct
cagggcgacttgctagccattatgtccgccggagcctacggcatgagcatgagctcaaac
tacaatacccgcccccgtgccgctgaggtcatggtggatggtgaccacgttcaccttatt
cgccaacgcgaatccctggagcaactgcttgccggcgagaaaatgcttccctga
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