Nitrosospira lacus: EBAPG3_004985
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Entry
EBAPG3_004985 CDS
T04907
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03030
DNA replication
nlc03410
Base excision repair
nlc03420
Nucleotide excision repair
nlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBAPG3_004985
03410 Base excision repair
EBAPG3_004985
03420 Nucleotide excision repair
EBAPG3_004985
03440 Homologous recombination
EBAPG3_004985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlc03032
]
EBAPG3_004985
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_004985
Enzymes [BR:
nlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBAPG3_004985
DNA replication proteins [BR:
nlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EBAPG3_004985
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EBAPG3_004985
NER (nucleotide excision repair)
GGR (global genome repair) factors
EBAPG3_004985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ARO87175
UniProt:
A0A1W6SN06
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All DBs
Position
1131321..1134062
Genome browser
AA seq
913 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHALPDLRNRNNEPTGAIYGVLNMLRRLHKDYQAHYSACVFDAK
GKTFRDDLYAEYKSHRPPMPPDLAAQIAPLHECIIAMGWPMLIVEGVEADDVIGTLAKQA
VHENMRCIISTGDKDIAQLVNPQVTLINTMSNETLDEAAVLAKFGVTPARMLDYLALVGD
AVDNIPGVEKVGPKTAVKWLTQYGTLDNLIAHANEIGGVVGENLRAALAWLSRARELLAI
KCDVALPVDVHDLGLQPQHTAKLAELYERLDFRTWLREMRQEADSASPQVIGDTPLAAGY
QPVDANRRSSATSGDYQIILTQSQLDEWIARIYAAPLVSLDTETTGLDPMQSQLVGISFS
IEPHQAAYLPLTHRYAGAPPQLPVDLVINKLKPWLEDAGKPKAGQNLKYDKHIFANHGIT
LNGIVHDTLLQSYVLESHRPHDMDNLALRHLGAKTISYDEVTGKGAGRIGFDQVDIERAM
QYAAEDADITLQLHQHMYPEIMKDEKLDYIYRVLEMPVLNILFEMERNGVLLDLKLLEIQ
SRELGEKMLSLESQAHAIAGQPFNLNSPRQIQEILFNQLKLPVIKKTPSGTPSTDEDVLQ
QLALDYPLAKVLLEYRGLAKLKSTYTDKLPRMVDAATGRVHTNYAQAVAVTGRLASNEPN
LQNIPVRTAEGRRIREAFIAAPGHRIISADYSQIELRIMAHISQDAGLLKAFAAGEDIHR
ATAAEVFGVALEAVNNEQRRYAKIINFGLIYGMSEFGLASQLGVERSAARAYMDRYFARY
PGVANYMQHTRETARKTGYVETVFGRRLWLPEINSSNGNRRQGAERAAINAPMQGTAADI
IKLAMIATHGWLAKAGLRSKLIMQVHDELVLEVPDDETGTVKDELPRLMGGAAKLDVPLL
VEVGVGPNWEQAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattgttgctggttgatggctcatcttacctgtatcgcgctttccatgcgctg
ccggatttgcgcaaccgcaataacgagccaaccggtgcgatttatggcgtgctcaacatg
ctgcgccgtttgcacaaggattaccaggcccattatagcgcgtgcgtatttgatgcaaaa
ggcaagacttttcgcgacgacctctatgcggaatataaatcgcatcgccctccaatgccc
cccgatctggcggcgcagattgcgcccctgcacgagtgcattatcgccatgggctggcca
atgctgatcgtggaaggcgtggaggcggatgatgtgattggtacgctggctaaacaagcc
gtgcacgaaaacatgcgctgcatcatttccaccggcgacaaggacattgcgcaactggtg
aatccgcaagtgacgctgatcaataccatgagcaacgaaacgctcgacgaagcggcagtg
cttgccaaatttggtgtgacaccagcacgcatgctcgattatctggcattggtgggtgac
gcggtggataacattccgggcgtggaaaaagtgggtcccaaaactgcggtgaaatggctc
acccaatatggcacattggataatctcatcgcgcatgccaatgaaattggcggtgtagta
ggtgaaaatttgcgtgcggcgctcgcttggctgagtcgagcgcgtgaattactggccatc
aagtgcgacgtcgcattacctgtcgatgtacacgatcttgggctgcaaccgcagcatacc
gcaaaactggccgagttgtatgagcggctggattttagaacctggttgcgggaaatgcgg
caggaggcggactcagcgagtccgcaagtgatcggcgatacgcccttggccgccgggtat
cagccagtggatgcgaatcggcgatcttcggctacgtcaggggactatcagatcattttg
acccagtcccaactggatgaatggatcgcacgtatctatgccgcgccactggtttcgctg
gatacggaaaccaccgggctggatccgatgcagtcgcaactcgtcggaatctcgttttcc
attgagcctcatcaggcggcttatctgccgctgacgcaccggtatgcaggcgccccaccg
caactgccggtcgatctcgtgatcaataaactcaaaccatggctggaagatgcgggcaaa
cccaaagcgggacagaatctcaagtatgacaagcacatttttgcgaatcatggcattact
ttgaacggaattgtccacgatacactattgcagtcctatgtattggaatcccaccgtccg
cacgatatggataatcttgcgttgaggcatcttggagccaaaaccattagctatgatgag
gtcaccggcaagggggccgggcgtataggttttgatcaggtggatatcgaacgcgcgatg
caatatgcggcggaagatgccgatatcacgctgcaactacatcagcacatgtaccccgaa
ataatgaaggacgaaaagctcgattatatctatcgcgtactcgaaatgccggtactgaac
atcctgtttgaaatggagcgtaacggcgtattactggacttgaaattactggaaatccaa
agccgcgaactgggtgagaaaatgctgtcgctggaaagccaggcccacgctattgccggg
cagccatttaatctgaattcaccccggcaaattcaggagatactgttcaaccagctcaag
cttcccgttatcaagaagacgccaagcgggacaccgtccaccgacgaagacgtgctgcaa
cagctcgcgctggattatcccctggcaaaagtcctgctcgaataccgcgggcttgccaag
ctcaaatccacctacacggacaagctgccgcgcatggtggatgccgccaccggacgcgtg
cacaccaattatgcgcaggcggtagcggtgaccgggcggctcgcgagcaatgagcccaac
ctgcaaaacattccggtacgcaccgccgagggacgccgtatccgcgaagcatttatcgct
gcaccggggcatcgcattatctccgcggattattcgcagatcgagctgcgcatcatggcg
cacatatcgcaggatgcgggattgctcaaagcgttcgccgcaggcgaggatatacatcgc
gcgaccgccgcggaagtgtttggtgtcgcgctggaagcggtgaacaatgagcagcgccgc
tatgcaaaaatcatcaacttcgggctgatttacggcatgtccgaattcggcctcgcctcg
cagctcggggttgaacgctcagccgcacgtgcgtacatggaccggtactttgcccgttat
ccgggggttgcgaattacatgcaacataccagggagaccgccagaaaaaccggttacgtc
gaaaccgtattcggacgcaggctgtggctgccggaaatcaatagttccaacggtaatcgc
agacaaggagcggaacgtgcagcaatcaatgcccccatgcaaggtactgcggccgatatc
atcaagcttgccatgatcgcgacgcatggctggctggccaaagcgggcttgcggagcaag
ctgatcatgcaagtccatgacgagctggtactggaagtgccggatgatgaaaccggaact
gtaaaggatgaactgccgcggctaatgggtggcgcggcgaaactcgacgtgccgctgctg
gtggaagtgggggtaggcccgaattgggagcaggcgcattag
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