Nitrosospira lacus: EBAPG3_005250
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Entry
EBAPG3_005250 CDS
T04907
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlc02000
]
EBAPG3_005250
Transporters [BR:
nlc02000
]
Other transporters
Pores ion channels [TC:
1
]
EBAPG3_005250
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Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARO87222
UniProt:
A0A1W6SN86
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Position
1183752..1185548
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AA seq
598 aa
AA seq
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MKSGRLLVLGLILNQAGLALANDVPKTVLPELTIYGGNRIPMTRELTNLRINTVKLKVED
NDWKTVLQEQVQVNESGPGGPVSLFMRGSNSNQALFLIDGVKMYSATAGMANFAAIAPGL
LSSVDVIQGGTSAAFGSNAVGGVIRGNIDIPKGVMFSAGGGSRFSERAASSLGIRGDSYY
AGVRVVQDIIRQGSATNSSNTFAFNPDNDPRKRVGIVAKAGGWITPDFQVEATALGSEVK
TSFDASPTTADMNIQSIAMANVRGIYSLPRDFSVMATYGGSVDRSTVRGAFPAVFNSHSL
QASVQLEKKLNIGRIFTGMDHEIQGVDSTTKFTSTSRSNVAAFVGAQLDTGRHVAEGMFR
HDENSQFGHYNTYSISLSRKLGDSWRVGALTSSSFKAPTFNDLYFPTLFGFGGNPNLKPE
RGRMHEAFVSYDGSSGASYRLGYFMNTIKDAIVINSIFSQVENISQARIDGFEVSGTQPI
DKNWTIRTNMTFQDPRNQQLNTILPRRSRMFGTVAMRYAMGNFTVEGIARGEGARYDDNE
NLHKLPAMIIVGFSASYKLQQGPTLRVQIDNFLDKKYQPAVGFNGIPRTVWASISHTF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaggccgcctgctggtcctggggttgatattgaatcaggctggattggctctg
gcaaacgacgttcccaagacggtccttccggaactgaccatttatggcgggaaccggatt
cccatgacccgggaactgaccaatctgcggattaacacagtgaaattgaaggtcgaagat
aacgactggaaaaccgtgctgcaagaacaggtacaggtaaatgagagcggtccggggggg
ccggtgtctcttttcatgcggggttccaactcgaaccaggcgttgttcctgatagacggc
gtcaaaatgtattccgccaccgccggaatggcaaattttgccgcaatcgcgccgggcttg
ttgtcgtccgttgatgtcattcaaggcggaacgtcagcagcgttcggatcgaacgcggtc
gggggtgtaatcaggggaaacatcgacataccgaaaggggtgatgttttcggctggcggc
gggtcgagattctccgagagagccgccagcagcctcgggataaggggagattcgtactac
gcgggcgtgcgcgtggtgcaggatatcatccgtcagggctcggcaacgaacagcagcaac
acgttcgccttcaatccggataacgacccccggaaacgagtgggaatcgtggccaaggcg
ggcggctggataacaccggattttcaggtggaagccaccgccttgggctccgaagtcaag
acctcatttgacgcttcgccgacaactgccgatatgaacatacaatcgatcgccatggcc
aacgtcaggggtatctattcgcttccccgtgatttcagcgtgatggccacatatggcgga
tccgtcgacagatcaacggtgcgaggcgcttttcccgccgtattcaatagccattccctg
caggcgtcggtgcagttggaaaagaaactcaatattggccggatctttacgggaatggat
catgagattcagggcgtagacagcacaacgaaatttacttccacaagcaggagcaatgta
gcggcatttgtgggagcgcaactggatactggccggcatgtggcggagggcatgtttcgc
catgacgagaacagccagttcgggcactacaacacttattcaatttccctgtcgcggaaa
ttgggtgattcctggcgggtgggagcgctgacttcgtcgtcattcaaggcgccgacgttc
aacgatctttattttcccaccctattcggattcggcggtaatcctaatctcaagcctgaa
cgcggccggatgcatgaagcgtttgtgtcatatgacgggagtagtggtgcaagctatcga
ttgggctattttatgaataccatcaaggatgccatagtgattaacagtatattttcgcaa
gtcgagaatatctcccaggcccgcatcgatggatttgaagtgagtggaacccagcctatt
gacaaaaactggacgatacggacaaacatgactttccaggatccgcgtaatcagcagctc
aatacgattcttccacgcagatccaggatgttcggcactgtggcgatgagatatgcaatg
ggaaatttcacggtggagggcatagcgagaggcgagggtgcgagatatgacgacaatgaa
aatctccacaaactgccggcgatgatcatcgtgggtttcagcgcatcctacaagcttcag
caaggccccaccctgcgagtccagatcgataattttctcgataagaaataccagccggca
gtcgggtttaacgggattccgcggacggtctgggcaagcatttctcatacattctga
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