Nitrosospira lacus: EBAPG3_005355
Help
Entry
EBAPG3_005355 CDS
T04907
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_005355 (smc)
Chromosome and associated proteins [BR:
nlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
EBAPG3_005355 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
AAA_29
ABC_tran
MJ1010-like_2nd
Motif
Other DBs
NCBI-ProteinID:
ARO87241
UniProt:
A0A1W6SN90
LinkDB
All DBs
Position
1214543..1218085
Genome browser
AA seq
1180 aa
AA seq
DB search
MRLSHIKLAGFKSFVDPTEIPVPGDLVGVVGPNGCGKSNVIDAVRWVLGESRASALRGES
MQDVIFNGSASRKPVGRASVELMFDNSLGKAAGQWSSYAEICIKRVLQRDGESTYHINNI
HVRRRDIADIFLGTGLGGRGYAIIEQGMISRIIEAKPEELRVFLEEAAGISKYRERRRET
ESRLADTRENLLRMSDICQELQKQLLHLEEQARVACQFKDMTARLHLAQNLLWRARKQEA
AMQRTAAEKESQSLQTALEFETANLRDAEKRLEDKRAQHYAIGDNLHEAQGELYAANAEV
AHIEQQIRHLRENHQRMEQQIGMVRSQLEHHEKQAEDAGDSLNHWHGELERARLAREAGK
QKAEMENEKLPRADSVFRLCREKLAETQRNLLLVEQAGQLEGSHRAHAEKTFEQLEMRRT
KLMVERGALPQPNAEELSHLHGETESTATGLKQKQEVLAQTENLLLAANEVQRELARKVQ
ALEQQITQAEARFNALQRLQHRLEGSQGLNAWLVKHQLDSVPRLWQGIQIEKGWEDALEA
VLRERLNSAWLERLEAAHDWVDDSPPGKWALFECPRLPVRSEQAIDMVEDREGWIPLHRY
LTCDNAGIKPVLDEWLSGIFVIEGVRDGLSQRTKLSPGETLVTREGHIFTHHSLTYYAPD
SQLHGVLVRQREMAQIKIETDALRAILSDEGYALEAAQEDCRELESSVSRLRYDAGQLQQ
EHHNAQIQALKLTELVERANQRRSQIDSELAEIDHQAVVETARVRVAETKLAEYRIQIEV
LREQVKSEQLAAEAAEQLLNAQRQLAQNAVKEVQETIFHEKTCQNKIHEVENSVQRINEN
TVELRDNLEKLQNDQSGFDETPLNNRLQEWLSLREQRERKLAAVRNILEGASNDLRGIEQ
ERLTAEQKLHPLRESINNARLKEQEARITENQFSAQLKEVGANEEELMQMLGKMRPSSLQ
ADINGLNIELAALGAVNLGALEELQSAQARKTYLDSQSQDLKEAVETLENAIRRIDRETR
ERLLETVDKVNGHLNELFPTMFGGGQAKLILKGEEILDSGVQIFAQPPGKKNSSIHLLSG
GEKALSALALVFSLFQLNPAPFCLLDEVDAPLDDSNTERFCNLVKKMSRHTQFVFISHNK
ITMEMAQQLIGVTMQEQGVSRVVAVEIEEAVRLSDAAMAT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctctctcatatcaagctcgccggttttaaatcctttgttgatcccacagaaatt
cccgttcccggggatctggtcggggttgtgggcccaaatggatgcggaaaatccaatgta
atcgatgcagtgcgctgggttctgggcgaatcgcgggcatccgcattacgcggcgaatcc
atgcaagacgttattttcaacggttccgccagtcgtaaaccggtcggacgcgcaagcgtg
gagctgatgtttgacaatagtctcggcaaggcggcggggcagtggtcgagctatgcggag
atttgtatcaagcgtgtgttacagcgggatggcgagtcaacttaccatatcaataacatt
catgtacgccgccgtgacattgccgatatttttctcggtaccggcttaggcgggcgtggc
tacgccataatcgagcagggcatgatctctcgcattattgaggcaaagcccgaggagttg
cgtgtatttcttgaagaggcggcagggatatcaaaataccgcgagcgtcgccgcgaaacg
gaatcgcgtctggcagatacgcgcgaaaaccttttgcggatgagcgatatttgccaggaa
ctgcaaaagcagttgctgcatctggaggagcaggcaagggttgcctgccagttcaaagat
atgacggcccggctgcacctggcgcagaatctattgtggcgggctcgcaagcaggaagcc
gccatgcagcgtaccgccgctgaaaaagagtcccagtctctgcaaacggccctcgaattc
gaaaccgcgaacctgcgcgacgcggaaaagcgcctggaagacaagcgtgctcagcattat
gccatcggtgacaacctgcatgaggcgcagggcgagctttacgctgccaacgcagaagtt
gctcatatcgaacagcagatacggcatttgcgcgagaatcatcagcgaatggaacaacag
atcggtatggtcaggagccagcttgagcatcatgaaaagcaagcggaggatgcgggtgac
agcttaaatcattggcatggagagcttgaacgcgcacgcctggctcgcgaggccggcaag
caaaaagccgagatggagaatgagaaattgccgcgggcggattccgtttttcgcttgtgc
cgggaaaaactggcagaaactcagcgtaacctgcttctggtggaacaggccgggcaattg
gaaggaagccatcgtgctcatgccgaaaagaccttcgagcagcttgaaatgcgccgcacg
aaactaatggtggagcgaggcgccctgccccagccaaatgccgaagagttatctcattta
cacggggagacggaaagtaccgcaaccggcctgaaacagaaacaggaagtgctcgcacaa
accgaaaacctgttgctggccgcgaacgaggtccagcgtgaattggcgcggaaagtacag
gcgttggagcaacagattactcaggcggaagcccgcttcaacgccttgcagcgcctacag
catcggctcgagggcagccagggattaaatgcatggcttgtcaagcatcaactggattcg
gtgccgcgtttatggcagggcatccagatcgagaaagggtgggaagacgcgctcgaagcg
gtgctgcgcgagcgccttaacagtgcatggctagaacgattggaggcggcgcatgactgg
gtcgatgattcgcctcccgggaagtgggcgttatttgagtgcccgagattgccggtacgg
agcgagcaggcaatcgacatggtggaggacagggaaggctggataccgctacaccgatat
ctgacttgcgacaatgcgggaataaaacctgtattggatgaatggttaagcgggatattt
gtgatagaaggggtgcgggacggcctttcgcaacgaacgaaactgtctcccggtgaaacg
ctggtcactcgcgagggtcatatttttacgcatcacagccttacttattatgcgcccgat
tcccaattacatggggtgttggtgcggcagcgggagatggctcagattaaaatcgaaaca
gacgcgctgagggccatcctctccgacgagggatacgccctggaggccgcgcaagaagat
tgccgggaactggaatcatctgtttcgcgcctacgttatgatgctgggcaacttcagcaa
gagcatcataatgcgcaaatacaggcattgaagcttactgagctagtcgagcgtgccaac
cagcgccggagtcaaatcgatagcgaactggcggaaatcgatcaccaggcggtcgtggaa
accgcccgggtgcgggttgccgaaacaaagctggcggaatatcgaatccagattgaagtt
ctgcgggagcaggtgaaaagcgaacagctggcggcggaagcggcggagcagcttctaaac
gcccagcgccagctcgcgcagaatgcggtgaaggaagtacaggaaaccatctttcatgaa
aaaacctgccagaataaaattcacgaggtagagaattctgtccaacgcatcaacgagaat
accgttgagctcagggacaatctggaaaaattgcagaatgatcaaagcggttttgacgaa
accccgctgaataatcgcctccaggaatggttgtcattgagagaacagcgggagcggaaa
ctggcagcggtacgtaatatcctggaaggcgcgtccaatgatttgcgcggaatagagcaa
gagcgcctgactgccgaacaaaagttgcatccgttgcgggaatccattaacaatgctcgc
ctcaaggagcaggaagccaggattaccgagaatcagtttagcgcgcaattaaaagaggtt
ggggcaaacgaagaggaattgatgcaaatgcttgggaaaatgcggccttcctccttgcag
gctgatattaacggcctcaacatcgagctcgccgccctgggtgcggtcaatcttggcgcg
ttggaggagttgcaatctgcccaggcacgtaaaacctatcttgattcccaatcccaggat
ttgaaagaagcggtggagactctggaaaatgcaattcgacggatagatcgtgaaacccgc
gaacgtctgctggaaacggttgataaagtcaacgggcatctgaacgaattgtttcccacc
atgttcggtggtggacaagcaaagctgatattgaagggtgaggagattcttgattcgggg
gtacagatctttgcgcaaccaccgggtaagaagaacagctccattcatttgctgtctggc
ggtgaaaaagccctgtcagcgctggcgctggtgttctcattgttccagttgaatccggct
ccattctgtctgctagatgaggtggatgcgccgctcgatgacagcaataccgaacgtttc
tgtaatcttgtaaagaaaatgtcgcgtcatacccagtttgtatttatcagccataataag
atcacgatggagatggcgcaacaactgataggtgtcaccatgcaggagcagggtgtctcg
cgcgtggttgcggtagagatcgaagaagccgtcagactgagcgatgcagccatggcgacc
tga
DBGET
integrated database retrieval system
