Nitrosospira lacus: EBAPG3_005940
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Entry
EBAPG3_005940 CDS
T04907
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_005940 (xerD)
Chromosome and associated proteins [BR:
nlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EBAPG3_005940 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
ARO87348
UniProt:
A0A1W6SNF3
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Position
1359267..1360178
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AA seq
303 aa
AA seq
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MSAAEFNAGLVDEFSDALWLEDGLSRNTLESYRSDLRQFSEWLGKKRWNDPALTAATHSD
LLEFLAFKVSVRVKASTTSRELSSLKRFYRFLLRQGRIQADPSLNIDTPKLPRSLPASLT
EADVEALLNAPDVEQSLGLRDRAMLEVLYASGLRVSELVSLDVMQISLNMGVVRVMGKGG
KERLTPLGEEALEWVIRYTREARSVLLGGKAANTLFVTARGSAMTRQAFWHLIKRHARVA
GINNTLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQIHALHH
PRG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggctgagttcaatgcagggttagtggatgagttctctgatgccttgtggctg
gaagatgggctgtcacgcaatacgctggagagttatcgcagcgatctgcggcaatttagc
gaatggcttggaaaaaaaagatggaatgaccccgcgctgacagcggcaacccattccgat
ctgctggagtttcttgccttcaaggtttcggtcagggtcaaggcgagcaccaccagccgc
gagctgtcgagcttgaagcggttttaccgttttctgctgcgtcagggtagaatccaggct
gaccccagcctcaatattgacacgccgaaactcccccgcagtctgcccgcaagtctgacc
gaagcagacgtggaagcgctgttgaatgcgcccgacgtggagcaatcattggggttgcgt
gatcgcgccatgcttgaggtgttatacgccagcgggctgcgggtatccgagctggtgagt
cttgacgttatgcaaataagcctgaacatgggtgttgtacgcgtaatgggcaagggtgga
aaggagcgactgacacctttaggcgaagaagcattagaatgggtaatccgctacaccagg
gaagcgcggtccgtattactgggggggaaggccgctaatacgctgtttgtcacggcccgg
ggttccgccatgactcgccaggctttctggcaccttatcaagcgccatgcgcgcgtcgct
ggtatcaacaacaccttgtctccccacactttacgccatgctttcgctacccatctactc
aatcacggtgctgatttgcgtgtcgtgcaactgctgctgggccacgccgatatttctacc
acgcaaatttatacccacgtggcgcgcgaacggctgaagcagatccacgccctgcatcac
ccgcgagggtaa
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