Nitrosospira lacus: EBAPG3_006380
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Entry
EBAPG3_006380 CDS
T04907
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00020
Citrate cycle (TCA cycle)
nlc00190
Oxidative phosphorylation
nlc00650
Butanoate metabolism
nlc00720
Other carbon fixation pathways
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
nlc01120
Microbial metabolism in diverse environments
nlc01200
Carbon metabolism
Module
nlc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nlc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nlc_M00149
Succinate dehydrogenase, prokaryotes
nlc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EBAPG3_006380 (sdhA)
00650 Butanoate metabolism
EBAPG3_006380 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
EBAPG3_006380 (sdhA)
00720 Other carbon fixation pathways
EBAPG3_006380 (sdhA)
Enzymes [BR:
nlc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EBAPG3_006380 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_binding_3
Thi4
GIDA
NAD_binding_7
Lycopene_cycl
NAD_binding_8
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ARO87432
UniProt:
A0A1W6SNV1
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All DBs
Position
complement(1435579..1437342)
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AA seq
587 aa
AA seq
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MAIAKRKFDAVIVGAGGAGMRAALQLSEAGLKVAVLSKVFPTRSHTVAAQGGIAAALGNV
TEDNWHWHMYDTVKGSDYLGDQDAIEFMCRQASEVVYELEHYGMPFDRLENGKIYQRPFG
GQSQNFGGAQATRSCAAADRTGHAMLHTLYQRNVRANTQFFVEWMGLDLIRDEDGEVCGI
TALDMETGEVMALQARATLFATGGGARIFQASTNAFINTGDGLGMAARAGIPLEDMEFWQ
FHPTGVYGVGVLISEAVRGEGGYLLNKDGERFMERYAPHAKDLASRDVVSRALTTEIKEG
RGCGRDADHLLLKLDHLGADVIKTRLPGIREIAMKFAHADPIHDPIPVAPTAHYMMGGIP
TNYYGQVVAPYKTGPEEVVQGFYAVGECACVSVHGGNRLGTNSLLDIVVFGRAAGNQIIE
ELKKNPHHKQLPADATDQSLARLARLDGQKDGESVAQVGDALRKTMQAHCGVFRFAEMLK
QGVSKIEEVAERARHTGIKDKSRVFNTARVEALELDNLVEVAVATMVSAEARTESRGAHA
RDDFPARDDDKWLKHTLFFSGGRRLDYKPVRLKPLTVESFPPKARTY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagccaagagaaaattcgatgcggtgatcgtcggcgccgggggtgcgggcatg
cgcgccgctttgcagctatcggaagcgggactcaaggtggcggtattgtccaaggtattt
cctacccgatcccacacggtggccgcgcagggcggcattgccgcagcactcggaaatgtc
accgaggataactggcactggcacatgtacgacacggtgaaaggatccgattatctcggc
gaccaggatgccatcgaattcatgtgccgccaggcgagcgaggtggtgtatgaattggag
cattatggcatgccgttcgatcggctggagaacggcaaaatttaccagcgtcccttcggc
ggccaatcgcagaactttggcggcgcgcaggcaacgcgctcgtgtgcggcggcggatcgc
accggtcacgcgatgctgcacacgctataccaacgcaacgtgcgcgccaacactcaattt
tttgtcgaatggatgggattggatctgatccgggatgaagacggcgaagtgtgcggtata
acggcactggacatggaaaccggcgaagtcatggcgctgcaggcacgagccacgctgttc
gccaccggcggcggcgcgcgcatattccaagccagcaccaatgcattcatcaataccggc
gatggtctgggcatggcggcacgggccggtatacctctggaagatatggaattctggcaa
ttccatcctaccggcgtgtatggagtcggcgtactcatcagcgaggcggtgcgcggcgaa
ggcggctacctgctcaacaaggatggcgagcgcttcatggaacgctacgcgccccacgcc
aaggatctggccagccgtgatgtcgtatcgcgcgccctgaccacggaaatcaaggaagga
cgcggatgtggcagggatgccgaccatctgctgctgaagctcgatcatctgggcgcggac
gtgatcaagacacggctgccgggcattcgtgaaattgccatgaaatttgcgcacgccgac
cccatccatgatccgattccggtggcgcctaccgcgcactacatgatgggaggcatcccc
accaattactacgggcaggtggtggcgccctacaaaaccgggcctgaggaagtggtgcaa
ggtttttatgcggtaggcgaatgcgcttgcgtttccgtgcatggcggcaatcgcctggga
accaattcactgctcgatatcgtggtgttcgggcgagcggcgggcaaccagattatcgaa
gagctgaaaaagaatcctcatcacaagcaattaccggcggatgccaccgatcaatcactg
gcccggctggctcggctggatggccagaaggatggcgaaagcgtggcgcaagtgggtgat
gcgttacgtaaaaccatgcaggcgcactgcggcgtgttccgtttcgcggaaatgctcaag
cagggtgtgtcaaaaattgaagaagtggcggaacgggccaggcacaccgggatcaaggat
aagagcagagtcttcaataccgcccgcgtggaagcactggaactcgacaaccttgtggaa
gtggcggtggccaccatggtgtcggccgaagcgcgcaccgaaagccgcggtgcccatgcc
cgtgacgattttccagcgcgggacgacgacaagtggctcaagcacactttattttttagc
ggaggacggcggctggactacaagccggtccggttgaaaccgttgacggtggaatcgttc
ccgcccaaggcgaggacatattaa
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