Nitrosospira lacus: EBAPG3_006390
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Entry
EBAPG3_006390 CDS
T04907
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
nlc
Nitrosospira lacus
Pathway
nlc00020
Citrate cycle (TCA cycle)
nlc00190
Oxidative phosphorylation
nlc00650
Butanoate metabolism
nlc00720
Other carbon fixation pathways
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
nlc01120
Microbial metabolism in diverse environments
nlc01200
Carbon metabolism
Module
nlc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nlc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nlc_M00149
Succinate dehydrogenase, prokaryotes
nlc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EBAPG3_006390 (sdhC)
00650 Butanoate metabolism
EBAPG3_006390 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
EBAPG3_006390 (sdhC)
00720 Other carbon fixation pathways
EBAPG3_006390 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Motif
Other DBs
NCBI-ProteinID:
ARO87434
UniProt:
A0A1W6SNQ6
LinkDB
All DBs
Position
complement(1437689..1438102)
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AA seq
137 aa
AA seq
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MDDERGVLEAKKLQRIRPKFLNLMEIRQPLPAVISVLHRISGALLFFPGIPLLLYGLEMT
LSSPQGYAQFQSLLASSLSKGALTLFLWFFLHHLCAGIRFLALDLHYGGELEQARLTSKM
VLAAGIILTLLISPLIW
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
gtggatgatgagcgcggcgtcttggaagcaaaaaaattgcaaagaatacgtcccaagttt
cttaatctgatggaaatcaggcagccgcttccggctgtgatttctgttctgcaccgcata
agcggcgcgctactatttttcccgggaatccctctcctcctttacggcctggagatgacg
ctgagctctcctcaaggctacgcccaattccagtctctcctggccagttctttgtccaaa
ggcgcgctgacactcttcctgtggttcttcctgcatcatctctgcgcgggtattcgtttt
ctcgcgctggatctgcattatggcggggagctggagcaagcgcgtttaaccagcaagatg
gtgctggccgcgggcatcattctcaccttgctgatctcgccgttgatatggtga
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