Nitrosospira lacus: EBAPG3_009930
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Entry
EBAPG3_009930 CDS
T04907
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nlc
Nitrosospira lacus
Pathway
nlc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EBAPG3_009930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_009930
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EBAPG3_009930
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EBAPG3_009930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ARO88063
UniProt:
A0A1W6SQJ5
LinkDB
All DBs
Position
2203674..2205755
Genome browser
AA seq
693 aa
AA seq
DB search
MIITFPNSPYKLHQSFSPAGDQPEAIDKLMEGIEDGLAFQTLLGVTGSGKTFTMAHVIAR
LGRPAIIMAPNKTLAAQLYAEMREFFPENAIEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKALLERDDAIIVATVSCIYGIGDPVDYHGMILHLRENEKITQREAIQR
LIEMQYERNEFEFGRGTFRVRGDVLDIFPAESSETAVRVSLFDDIVESMVLFDPLTGRTL
KQVSRYTVYPSSHYVTPRSTTLRAIGTIKDELRERIDFFQKNHKLVELQRIEQRTRFDLE
MLNELGFCKGIENYSRHLSGKKPGQPPPTLIDYLRPDTLMVIDESHVTIPQVGGMYKGDR
SRKENLVEYGFRLPSALDNRPLRFDEFRKMMPQTVFVSATPAEFERVHSGQVVEQVVRPT
GLVDPQIEIRPATTQVDDLMSEVGLRTAKGERVLVTTLTKRMAEDLTDYFSDHGIKVRYL
HSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARHINGTALLYADKITDSMRRAMDETERRRNKQILFNLEHGITPRSVHKRVKDL
IDGVYNIETAQQHLKAAQVQARYDSMSEVQLAKEIKLLEKQMLDAAKNLEFEQAAQYRDE
LKRLKNKLFVGFVEPEPEVSREKTEPALRKVNK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgatcattacctttcccaatagcccctacaagctgcatcaatcgttttcccctgctggt
gatcagcctgaagccatcgacaagctgatggaagggatagaggacggccttgcgttccag
acgctgctgggcgtgacgggctccggcaagacttttaccatggcccacgtaattgcacgg
cttggccgccccgcgatcatcatggcaccgaacaaaacgctggcggctcagctctacgca
gaaatgcgcgagtttttccctgaaaacgccatcgagtactttgtctcctattacgactat
tatcaaccggaggcctatgtcccttcgcgcgacctgttcatcgagaaggattccagcatt
aacgaacacatcgagcaaatgcgcctgtccgccaccaaggcactgcttgagcgggatgat
gccataattgtcgccaccgtatcatgcatatacggtatcggcgacccagtggattatcac
ggcatgattctgcatctgcgcgaaaatgaaaaaatcacccagcgcgaagccatacaacgc
ctgattgaaatgcagtatgagcgcaatgagtttgagttcggccgtggaaccttcagggtg
aggggtgacgtgctcgacatatttccggcggaaagttcggaaaccgcggtgcgcgtctcg
ctgtttgacgatattgtcgaaagcatggtgttgttcgatcctctcaccggacgcacgctg
aagcaagtatcgcgctatacggtttatccctccagccactatgtaacgcctcggagcact
acgttgcgcgccatcggtaccatcaaggacgaactgagagagcgcatcgattttttccag
aaaaaccataagctcgtggagctgcaacgtatcgaacagcgcactcgctttgatctggaa
atgctcaatgaactgggtttctgcaaaggcatcgaaaattactcgcggcacctttcgggg
aaaaaaccggggcagccgccgcctactctgatagattatctgcgccccgatacgctgatg
gtgattgatgagagccatgtgaccatcccgcaggtgggtggaatgtacaagggagatcgt
tcccgcaaggaaaatctggtggaatatggctttcgcctgccttccgcactggataaccgg
ccattgcggttcgatgaattcaggaaaatgatgccgcaaacggtatttgtctccgcaacc
cctgcggagttcgagcgtgtgcacagtggccaggtggtggaacaggttgtgcgccccacc
ggtctggtggaccctcagatcgagattcgtcccgcaactacccaggtcgacgacctcatg
tcggaagtcggcctgcgcactgcaaagggcgagcgggtgttggtgacaacgctgaccaag
cgcatggccgaggatttgaccgattatttttccgatcatggcatcaaagtgcgctacctc
cattccgatatcgataccgtggagcgggtggagatcattcgtgatttgcggctgggaaaa
ttcgacgtgctggtgggtatcaatcttctgcgggaaggattggacattccggaagtgtcg
ctggtagcgatactggatgccgacaaggaaggatttctgcgttccgaacgctcactgatc
cagacgataggccgggcagcgcgccatatcaatggcactgcgcttctctacgccgataag
attaccgattccatgcgtcgcgccatggatgaaaccgagcggcggcgcaataaacaaatc
ctgtttaatcttgagcatggcattacgccgcgaagcgtgcacaaacgtgtcaaggatttg
atcgatggcgtttacaacattgaaaccgcgcaacagcatttaaaggcggcacaggtacaa
gcccgttatgattccatgagcgaggtgcaactggcgaaagaaatcaagctgctggaaaag
cagatgctggatgcagcaaagaatcttgaattcgagcaagcagcgcaatatcgtgatgag
ttaaaaagattaaaaaacaagctgttcgtaggatttgttgaacctgaacctgaggtaagc
cgggaaaagacagaaccggccctcaggaaggtgaataaataa
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