Nitrosospira lacus: EBAPG3_010090
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Entry
EBAPG3_010090 CDS
T04907
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03030
DNA replication
nlc03430
Mismatch repair
nlc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBAPG3_010090 (holB)
03430 Mismatch repair
EBAPG3_010090 (holB)
03440 Homologous recombination
EBAPG3_010090 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlc03032
]
EBAPG3_010090 (holB)
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_010090 (holB)
Enzymes [BR:
nlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBAPG3_010090 (holB)
DNA replication proteins [BR:
nlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EBAPG3_010090 (holB)
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EBAPG3_010090 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
NACHT
VapE-like_dom
QueC
Motif
Other DBs
NCBI-ProteinID:
ARO88093
UniProt:
A0A1W6SQN2
LinkDB
All DBs
Position
complement(2234392..2235510)
Genome browser
AA seq
372 aa
AA seq
DB search
MNNIYSWQNETWRILTQDSASLGHALLLRGRQGIGKLAFARQLAKFWLCEKPSIEGYACG
NCQSCMWFEQGSHPDFRLIEPEAMTAMAGSSDGGSSEDGTDMETGAEMEFLPDSTGESGS
TKSRKKPSKQISVAQVRSVADFINISSHQNGYKIILFHPAETMNPAAANALLKNLEEPPP
LTLFILVTHHAQHLLPTLRSRCRQIPMPAPDAVTAAAWLAQQGVKDPATCLASSGYAPLA
ALQYTNDDYLARHEAFIRQISVPGNFNPVVLAEEMQKLDLSTLVNWLQKWCYDLMSFCTT
GKVRYHLNMITTIKSLASGIDTRALAAYLRTLNARQRLAHHPLNSRLFLEEMLFSYVISI
APASSARSRRGD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatctattcttggcaaaatgagacgtggcggatattgacgcaagacagcgca
tccttgggtcatgctttattgctgaggggcaggcaaggtataggcaagcttgcattcgct
cgccagctcgctaaattctggctatgcgagaagccttcgattgaagggtatgcgtgcggg
aattgccaaagctgcatgtggttcgaacagggaagtcatccggattttcgcctgattgaa
ccggaagcgatgacggcgatggcgggatcgtccgatggcggttcaagtgaagatggcacg
gatatggaaactggcgctgaaatggaattcctcccggattccaccggagaatccggcagt
acgaaatccaggaagaaacccagcaagcaaatcagtgttgcgcaagttcgctctgttgcc
gattttattaatatatccagccaccagaatggctacaaaatcatcctttttcatcctgcg
gaaacgatgaatccagctgctgccaacgccttgctgaagaatctggaagagccgccgccg
ctgacattgttcatcctggtgacgcaccatgctcagcatttgctgccgaccttgcgcagc
cgctgccgccagattcccatgccagcgcctgacgccgttaccgcagctgcctggcttgcg
cagcagggagtcaaggacccggcgacgtgccttgcttcctcgggctatgcaccactggcc
gcgctgcaatacaccaacgacgattatcttgcacggcatgaggcattcatcaggcaaatc
agcgtgccgggcaactttaaccccgtcgtgctggctgaggaaatgcaaaaactggatttg
tccacactggtcaattggctgcagaaatggtgctatgacttaatgagtttttgcaccacg
ggaaaagttcgctaccatctgaatatgatcaccaccatcaaatcactggcatcggggatc
gatacgcgcgcactggcggcttatttgcgcaccttgaatgcaagacaacgcttggcgcat
catccgcttaactccagattatttctggaggaaatgctgttttcctacgtaatatcgatt
gctcccgcatcttccgcccgaagcaggcgtggtgactga
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