Nitrosospira lacus: EBAPG3_011560
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Entry
EBAPG3_011560 CDS
T04907
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EBAPG3_011560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlc03019
]
EBAPG3_011560
03009 Ribosome biogenesis [BR:
nlc03009
]
EBAPG3_011560
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_011560
Enzymes [BR:
nlc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EBAPG3_011560
Messenger RNA biogenesis [BR:
nlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EBAPG3_011560
Ribosome biogenesis [BR:
nlc03009
]
Eukaryotic type
90S particles
RNase
EBAPG3_011560
Prokaryotic type
rRNA processing factors
EBAPG3_011560
Chromosome and associated proteins [BR:
nlc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EBAPG3_011560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ARO88359
UniProt:
A0A1W6SRE7
LinkDB
All DBs
Position
2551319..2551993
Genome browser
AA seq
224 aa
AA seq
DB search
MASNILCRKIGYAFNHPKLLRQALTHRSHSLPHNERLEFLGDSILNCAVAGLIFRRFPDV
TEGDLSRIRANLVNQQALAELAQTLELGGLIRFGEGELKSGGDRRPSILADTLEAVLGAI
YLDGGFPEAERVVVSLFTPLLQGLDPQILSKDPKTLLQEYLQSRRLALPQYIVVAATGEA
HQQQFQVECVVPKPSLRTAGTGASRRSAEQEAARQAYEQLQTQN
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacatactttgccggaaaatcggctatgcctttaatcatccgaagttgcta
cgtcaggcacttacccatcgcagccatagcctgccgcataatgagcgtcttgaatttctt
ggtgacagcatactcaactgcgcagttgctgggttgatattcaggcggtttcccgacgtg
accgagggtgatttatcgcgaatacgtgccaatcttgtcaatcagcaggcattggccgaa
ttggcgcaaacgctcgagttgggcggattgatcagattcggtgagggggagctcaaaagc
ggcggagatcgacgcccctcgatactcgccgatacgctggaagcggttctgggagcaatt
tatcttgatggaggttttccggaagccgagagagttgtcgtcagtcttttcactcccctg
ctccagggactggatccgcagatactgagcaaagaccccaagaccctcttgcaggagtac
ctgcagagccgcagactggccctcccgcaatatattgttgtcgccgccacgggcgaagcc
caccagcaacaatttcaggtggaatgcgtggttccgaaaccgtcccttcgcactgcggga
acaggcgcctctcgccgcagcgccgagcaggaagcagccaggcaagcttatgaacagctc
caaacacaaaattag
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