Nitrosospira lacus: EBAPG3_011840
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Entry
EBAPG3_011840 CDS
T04907
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_011840
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EBAPG3_011840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
GvpD_P-loop
AAA_16
AAA_22
AAA_24
AAA_5
nSTAND3
DUF7125
AAA_14
RecA
SLFN-g3_helicase
AAA
NTPase_1
MCM
ABC_tran
DUF7129
AAA_19
GvpD_bR2
AAA_29
PAXNEB
DAP3
Motif
Other DBs
NCBI-ProteinID:
ARO88407
UniProt:
A0A1W6SRI1
LinkDB
All DBs
Position
complement(2604678..2606027)
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AA seq
449 aa
AA seq
DB search
MAKPKSIYSCTECGGQTPKWQGQCPHCQAWNTLVEAIAEKAVSRFTPVSETGEVQNLSEV
EAGDEPRYSTGVAEFDRVLGGGLVHGGVVLLGGDPGIGKSTLLLQALCHMSAARNVLYVS
GEESARQVALRAKRLALDARSVHLLAEIRLERIQAVLASRKPDIAVIDSIQTVYSDALQS
APGSVAQVRECAAQLTRLAKASGTCIILVGHVTKEGALAGPRVLEHMVDTVLYFEGDTHS
SFRLIRAFKNRFGAVNELGVFAMSEKGLREVNNPSALFLSHHGGQVPGSCVMVTQEGTRP
LLVEIQALVDEAHAPNPRRLSVGLEQNRLAMLLAVLHRHAGIACFDQDVFVNAVGGVKIT
EPGADLAVLLAIVSSLKNKPLPEKMVVFGEIGLAGEVRPVQRGQERLKEAAKLGFTQAII
PKANKPKQMLPGMEIIVVERVEEAVANMR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccaaaatccatttattcctgcaccgagtgcggcggccagactccgaaatgg
cagggtcaatgcccacattgccaagcatggaacacactggtcgaggcgatcgccgagaaa
gccgtatcgcgctttactcccgtatccgaaacgggcgaagtgcagaatttgagcgaagtg
gaggcgggcgatgagccacgctattccaccggggtggcggagttcgaccgggtgctgggc
ggtggactggtgcatgggggtgtggtattgctgggcggcgatcccggcatcggaaaatcc
accctgctgctgcaagcgttgtgtcatatgtccgccgcgcgcaatgtgctgtatgtgagc
ggcgaggaatcggcgcggcaggtcgccctgcgggcaaaacgcctggcgctggatgcaagg
tctgtgcatttgctggcggaaatccggctggagagaatccaggcggtgcttgcttcacgc
aaacccgacatagcggtcatcgactcgatccagacagtatattccgacgcgctgcaatcc
gcacccggttcggtcgcgcaggtgcgcgagtgcgccgcgcaattgacgcggctggccaag
gccagcggcacatgcattattctcgtagggcatgtgaccaaggaaggcgcgctggccggg
ccgcgcgtgctggagcacatggtggatacggtgctctatttcgaaggcgatacgcattcc
agttttcgcctgatccgggctttcaagaaccgctttggcgcggtgaacgagctgggcgta
tttgccatgagcgaaaaaggcttgcgcgaagtgaacaatccttcagcgctgtttctttct
caccatggcggacaggtaccgggttcctgcgtgatggtgacccaggaaggcacacgcccg
ctactggtggaaattcaggccttggtggatgaggcgcacgcgcccaatccccggcggcta
agcgtcgggctggaacaaaaccggttggcgatgctgctggctgtactgcatcgtcatgcc
gggatcgcatgttttgatcaggatgtgttcgtcaatgcggtgggtggagtgaagattacc
gagccgggcgcggatctggcagtgttgctcgctattgtttcctcgctcaagaacaaaccc
ttgcccgaaaaaatggtggtgtttggtgaaatcgggctggcgggggaagtgcgccccgtc
cagcgcggccaggaacggttgaaagaagcagccaagctggggtttacgcaggccattatt
ccaaaggcgaataagccgaaacagatgcttcccggcatggagatcattgtggtggagcgg
gtggaagaagccgttgcaaacatgcgctaa
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