Nitrosospira lacus: EBAPG3_012020
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Entry
EBAPG3_012020 CDS
T04907
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlc03016
]
EBAPG3_012020
Enzymes [BR:
nlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EBAPG3_012020
Transfer RNA biogenesis [BR:
nlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EBAPG3_012020
Prokaryotic type
EBAPG3_012020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
RPN6_C_helix
Motif
Other DBs
NCBI-ProteinID:
ARO88437
UniProt:
A0A1W6SRL4
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All DBs
Position
complement(2637793..2638752)
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AA seq
319 aa
AA seq
DB search
MNPQPLNPKAGQFKRIKRKISGVLLLDKPSRISSNQALQIAKRIFTAAKAGHTGTLDPLA
TGLLPICFGEATKFSSALLGADKTYEATLELGYISTTGDAEGEISACDALSRDMKPTLLQ
AETILRSFVGPIMQVPPMYSALKHRGKPLYAYARAGVEIERQAREVVIYDLQLKVLADTK
MDIVVKCSTGTYVRTLAEDIGKALGCGGAYLTVLRRSVIGGFGLSQAYTLDALEAMPLAQ
RDACLHSIDSLLHNFPAATLDGAGVTSLRQGQVVKACFMGDSPEGTKIRLYDQEKRFLGV
GEVTVQGEIAPRRLIDCME
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaacccacagccattaaacccgaaggctgggcaattcaagcgcatcaaacgtaaaatc
agcggcgttctgctgcttgataaaccttcccgcatctcctccaatcaggcgctgcaaatc
gccaaacgtatttttacggcagccaaggctggtcataccggtacgctcgatcccctggcc
acgggattgttgccgatctgcttcggtgaggctactaagttttcgtcggcgctgctgggt
gcggacaagacgtatgaagccacgttggaattaggctatatcagtacgaccggcgatgca
gagggtgaaatttcagcatgcgatgcgctatctcgagatatgaaaccgacgctgttgcag
gccgagactatattacgaagctttgtcggcccgattatgcaggtgccgccgatgtacagt
gccttgaagcaccggggtaagcccttgtatgcctatgcgagagccggtgtggagatcgag
cggcaagcgcgtgaagtcgtcatttatgatttgcagttgaaggtattggcggacacgaaa
atggatatcgtggtcaagtgcagcacaggtacttacgtccgtactctggccgaagacatt
ggcaaggcgttgggatgcggaggggcctatcttacggttttgcgccgcagcgttataggc
ggatttggtctgtcgcaggcctatacgctggatgcgcttgaagcaatgccgctggcgcaa
cgcgacgcctgtctgcactcgatagacagccttttacataatttccccgctgctacgctg
gatggcgcgggcgtgacatcgttgcggcaggggcaagtggtgaaagcctgtttcatgggc
gattcgccggaaggaacaaaaattcggttgtacgatcaggaaaagcgctttctcggcgtg
ggagaggttacggttcagggtgaaatagcaccgagaaggcttatagattgtatggaatga
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