Nitrosospira lacus: EBAPG3_012390
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Entry
EBAPG3_012390 CDS
T04907
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlc03000
]
EBAPG3_012390
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_012390
Transcription factors [BR:
nlc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EBAPG3_012390
Chromosome and associated proteins [BR:
nlc03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
EBAPG3_012390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
TetR_C_6
TetR
TetR_C_37
TetR_C_13
TetR_C_11
TetR_C_24
GCP_C_terminal
Motif
Other DBs
NCBI-ProteinID:
ARO88504
UniProt:
A0A1W6SRR3
LinkDB
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Position
complement(2718993..2719586)
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AA seq
197 aa
AA seq
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MQAKRSDRKDQILRVLAQMLEEPRPVKITTASLAVKLDVSEAALYRHFASKAQMFEGLIE
FIEATLFSLINRLTTEEKSAMRQIEGILSLLLGFAQKNPGMTRVLTGDALINENDRLQLR
INQLHDRLEATLKQVLRFAASEGEISANLDIPAQANLLMCYVAGRWHQFAKSGFKRDPME
YWEAQRRELLSCAVSRT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaagcgcagtgacagaaaagatcaaatcctccgggttctcgcgcaaatgctg
gaagagccacgtcctgtgaaaatcactaccgcatcgctggcggtcaagctggatgtttcc
gaggcggcgctataccggcattttgccagcaaggctcagatgttcgagggcctgatcgag
ttcatcgaggccactttgttcagccttatcaacagactgacgacggaagaaaaaagcgcc
atgcggcaaattgaagggatattgtcgctattgcttggctttgcgcagaaaaatccgggt
atgacgcgagtgttgaccggcgacgcgctgataaacgagaatgaccgcctgcagctacgc
atcaatcaattgcatgaccggcttgaggcgacgttgaaacaggtgctgcgcttcgccgcc
agcgagggcgaaatctcggccaatctggatatccccgcccaggcgaacctgctgatgtgc
tatgtagcggggcgctggcaccagttcgccaaaagtggcttcaagcgcgacccgatggaa
tattgggaggcccagcgcagggagttgctgtcatgtgccgtatctcggacatag
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