Nitrosospira lacus: EBAPG3_013225
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Entry
EBAPG3_013225 CDS
T04907
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_013225
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EBAPG3_013225
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
FtsK_SpoIIIE
AAA_30
TrwB_AAD_bind
AAA_16
T2SSE
AAA
AAA_19
nSTAND3
Hydrolase
AAA_28
AAA_7
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ARO88653
UniProt:
A0A1W6SS83
LinkDB
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Position
complement(2900968..2902491)
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AA seq
507 aa
AA seq
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MSEPLLIATSGHPIGLLPGLANRHGLITGATGTGKTVTLQVLAEQFSSIGVPVFLADIKG
DLSGLAAPGKSSPKMGERLAQLKLDEPRWTACPVTFWDIYGKSGHPVRATISDMGPLLLG
RLFNLNDTQQGVLALVFRIADDNGLLLLDMKDLRAMLQFVGDNAKNLTVEYGNISAASIG
AIQRSLLEIEQQGGSYFFGESMLDISDLMQTDSQGRGMINILAADKLMNSPKLYSTFLLW
ILSELFEHLPEIGDPEKPKLVFFFDEAHLLFNEAPRPLLEKIEQVVRLIRSKGVGVYFVT
QNPLDVPESVLGQLGNRVQHALRAFTPRDQKAVRSAAQTMRANPEFDTEKAITELSVGEA
LVSLLDEKGRPCIVERAFIYPPASRIGPLTDTERAAIIKSSVIFGHYEQIVDRESAYEII
KSRTVTRQDTGSEAAQQASSETQTTQGGGMMDMLGGMLLGKTGPRGGHHPGILDAAAKSA
ARSIGSQVGREIFRGVLGGIFGSGRRR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccattattgatcgcaacttccggtcatccaatcggattgctgcccggtctt
gccaatcgacatggactcatcaccggtgcgaccggtaccggcaagaccgttacgctacag
gtattggctgaacaattctcctcaatcggtgtgccggtatttctggcagatatcaagggc
gacttgtcggggctcgccgctccgggcaagagttccccgaaaatgggggagcggttggcg
caactcaaactcgacgagccgcggtggacggcgtgtccggtcaccttctgggatatatac
ggaaaatccggacatccggtacgcgcaacaatatctgatatggggccattgctgctcggg
cggctcttcaatctgaacgacacgcaacagggtgtgctggcactggtattccggatcgcg
gacgataacggcctcttgctgcttgatatgaaagatctccgcgcgatgttgcagtttgtc
ggcgacaacgccaagaatttaaccgttgagtatggcaacatctccgctgcctcgatcggc
gcgatccagcgctcgctgcttgaaatcgagcagcagggaggcagttacttcttcggcgaa
tcgatgctcgacatcagcgatttgatgcagactgatagtcagggccgaggaatgatcaat
attcttgccgctgacaagctcatgaattcaccaaagctatactcgacattcctgctgtgg
atattgtccgaactattcgagcacctgccggaaattggcgatcccgagaagccaaaactg
gtgttcttttttgatgaagcccatctgctattcaacgaagcgccccgtccactgctggag
aaaatcgagcaagtagtgcgattgatacgctccaaaggggtcggggtgtattttgtgaca
cagaatccgcttgatgttcccgagagtgttttgggtcagcttggcaatcgtgtacaacat
gctttgcgcgcatttacgccgcgtgaccagaaagcggtcaggtcggcggcgcaaaccatg
cgcgccaatcctgagttcgacaccgagaaggccattacagaactctcggttggcgaggca
cttgtatcgttattggatgagaagggccgcccctgtattgtggaacgggcattcatttac
ccgccggcctcgcgaataggcccgcttaccgatacggaacgcgcggccatcatcaagtca
tctgttattttcggacattacgaacagatagtggatcgcgaatcggcttatgaaataatc
aaaagccgcaccgtaaccaggcaggataccgggagtgaagcggcgcaacaggcaagtagc
gaaacacagactacgcagggtggcggcatgatggacatgctgggcggcatgcttctcggc
aaaaccggtcctcgcggggggcatcatccaggtattctcgatgcggcagccaaaagcgcg
gcgcgttcgatcggctcgcaggttggccgcgagatcttccggggggttttagggggcatc
ttcggcagtgggcgccggcgttga
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