Nitrosospira lacus: EBAPG3_013350
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Entry
EBAPG3_013350 CDS
T04907
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlc03032
]
EBAPG3_013350
03036 Chromosome and associated proteins [BR:
nlc03036
]
EBAPG3_013350
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_013350
DNA replication proteins [BR:
nlc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EBAPG3_013350
Chromosome and associated proteins [BR:
nlc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EBAPG3_013350
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EBAPG3_013350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
ARO88673
UniProt:
A0A1W6SSA3
LinkDB
All DBs
Position
complement(2925485..2925769)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELISRLAARYPQLVAKDAELAVKVILDAMAKSLSQGQRIEIRGFGSFDLNYRPPRI
GRNPKSGEKVRVPEKYVPHFKAGKEMRERVDHKN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaattgatctcaaggcttgcagcccgttatccgcagttagtggcgaag
gatgccgagcttgcagtcaaggtgatacttgatgccatggccaagagtctgtcacagggg
cagcgtattgaaattcgcgggtttggcagcttcgatctgaactaccgcccgccgcgtatc
gggcgcaacccgaaatccggagaaaaagtgcgagttcccgagaagtatgttcctcatttt
aaagcagggaaggaaatgcgtgagcgggtcgatcacaagaactaa
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