KEGG   Nitrosospira lacus: EBAPG3_013655
Entry
EBAPG3_013655     CDS       T04907                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nlc  Nitrosospira lacus
Pathway
nlc02024  Quorum sensing
nlc03060  Protein export
nlc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nlc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EBAPG3_013655
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EBAPG3_013655
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EBAPG3_013655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nlc02044]
    EBAPG3_013655
Enzymes [BR:nlc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EBAPG3_013655
Secretion system [BR:nlc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EBAPG3_013655
  Eukaryotic Sec-SRP protein
   EBAPG3_013655
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin AAA_31 AAA_30 Helicase_RecD ArsA_ATPase cobW APS_kinase AAA_16 KTI12 ParA nSTAND3 AAA_33 Thymidylate_kin Mg_chelatase AAA_14 AAA_19
Other DBs
NCBI-ProteinID: ARO88726
UniProt: A0A1W6SSG1
LinkDB
Position
2988328..2989677
AA seq 449 aa
MFDNLTSRLSVVIKTLRGEARLTEANIQDALREVRMALLEADVALPVVKEFIARVKEKAV
GKEVMSSLSPGQALVGVVHQELIAIMGGEKTDINLAAVPPAVILMAGLQGAGKTTSSGKL
AKWLMEQKKKKVLLVSCDIYRPAAIQQLELLAKQIGAAFFPVQAGQQPKEIAAAALDFAR
RHFHDVMIVDTAGRLAIDEAMMAEISALETLLKPIETLFVVDAMQGQDAVNTAKAFAEAL
PLTGIILTKLDGDARGGAALSVLQVTGKPIKFAGVAEKMTGLEAFHPDRMASRILGMGDV
LGLIEEAQRGVDQQAAENLAKKIKSGKSFDLNDFKMQFQQMRNMGGMGAMMDKLPTQLTQ
AAQKVKMDDKVMGRTEGIINAMTPQERVKPEILKASRKRRIATGAGVTVQEVNRLLAQFE
QTQKMMKMMNKGGMAKMLRGMKGMLPGMR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtttgacaatcttaccagccgtctttccgtcgttatcaaaaccctgcggggcgaagca
aggttgactgaagccaatatacaggacgcgttgcgtgaagtacgcatggcgctacttgaa
gcggacgtggctttgccggtagtgaaagagtttattgcgcgcgtcaaggaaaaagcggtc
ggcaaagaagtgatgagcagcctttccccggggcaagcgctggtgggtgtggtgcaccag
gaactgatcgccatcatgggaggagagaagaccgatatcaacctggcggctgtaccgccg
gcagtcatccttatggcgggactacagggtgccggcaagacgaccagcagcggcaagctc
gcgaaatggctgatggagcagaaaaagaaaaaggtattgctggtttcctgtgatatctat
cggcccgctgccattcaacaactggaactgctggcaaagcaaatcggcgcagccttcttt
ccggtccaggcagggcaacagccaaaagaaatcgccgccgccgccctagatttcgcccgc
cgccacttccacgatgtcatgattgttgacaccgccggacgcttggctatcgacgaagca
atgatggcggaaatcagtgcgctggaaacgctgctgaaacccattgaaaccctgttcgtg
gtggatgcaatgcaagggcaggatgcggtcaataccgcaaaagcatttgccgaggcgctg
cctttgacggggatcatcctcaccaagctcgatggcgatgctcggggcggggccgcgctg
tccgtgcttcaggttaccggcaagccgataaaattcgccggcgtggctgaaaaaatgacc
gggttggaggcatttcatcccgatcgcatggcttcgcgcattctcggcatgggggacgtg
ctgggattgattgaggaagcccagcgcggcgtggatcaacaagcggcggagaatctggcc
aaaaagataaaatcgggtaaaagcttcgatctaaacgattttaagatgcagttccaacaa
atgagaaatatgggcggcatgggcgccatgatggacaaactgcccacacaattgactcaa
gccgctcagaaggtaaaaatggacgacaaggtcatgggacgcaccgagggcatcattaat
gccatgacgccacaagagcgcgtcaaaccggaaatcctgaaggcgtcacgcaagcgccgc
atcgccacgggagcgggtgtcacggtacaggaagtgaaccgcctgctggcgcaattcgaa
caaacgcagaagatgatgaaaatgatgaataaaggcgggatggcaaaaatgctgcgagga
atgaagggaatgctgccgggaatgcggtaa

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