Nitrosospira lacus: EBAPG3_013910
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Entry
EBAPG3_013910 CDS
T04907
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlc03032
]
EBAPG3_013910
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_013910
Enzymes [BR:
nlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EBAPG3_013910
DNA replication proteins [BR:
nlc03032
]
Prokaryotic type
DNA Topoisomerases
EBAPG3_013910
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EBAPG3_013910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ARO88774
UniProt:
A0A1W6SSI8
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All DBs
Position
3046300..3048861
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AA seq
853 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELSNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMSRIAHELLADLDKETVDFGPNYDGSEKEPLILPAKIPNLLINGSSGIAVGMAT
NIPPHNLNEVVEACLALLKNPETTIEELIEIIPAPDFPTAGIIYGVAGVREGYQTGRGRV
VMRARTHFEDMEKGSRQSIIIDELPYQVNKANLLIRIGELVRDKKIEGISDLRDESDKSG
MRVVIELRRGEVPEVVLNNLYKETQMQDTFGMNMVALLDGQPRLLNLKQMLDAFLRHRRE
VVTRRTVFELKKARERGHLLEGLAVALSNVDEVIALIKAAPTPAVAKEALMSKLWRSGLV
EEMLARASVDTKAFRPDGLAPEFGLSRDGYRLSDAQAQAILELRLQRLTGLEQDKIVNEY
KEVMERIADFLDILSKPERITAIITEELVAMKQQFGDKRRSEIVINTQDLSMEDLIASAD
VVVTLSHSGYIKSQPLDDYRAQKRGGRGKQATGTKEDDFIDNLFIANTHDYILCFSSRGR
VYWIKVYAVPQGGRASRGKPIVNLVQLEEGEKINAILPVKEFDENRYIFMATSFGTVKKT
PLSEFSRPRASGIIAVGLDEDDYLIGVALTEGKHDVMLFSDGGKAVRFDENDVRAMGRGA
RGVRGMKLGKGQKVISLLVAESEEQAVLTATENGYGKRTPISEYTRHGRGSQGMIAIKTS
QRNGKVVAARLVRQDDEIMLITTGGVLIRTRVKEVREMSRATQGVTLINLDDGEKLAGLE
RVVETDEDNGVIL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcgaaagaaaccctgccaatcagcctcgaagaggagatgcgccgctct
tacctcgattacgccatgagcgtgatcgtggggcgggcattgccggacgtgcgcgatggc
ttgaaacccgtgcaccggcgggtactattcgccatgcacgaactctccaatgactggaac
cgcccatataagaaatccgcgcgtatcgtcggcgacgtgatcggcaagtatcatcctcat
ggcgataccgccgtgtatgacacgatcgtgcgcatggcgcagaatttttcgctgcgctac
atgctggtcgacggccagggcaacttcggttcggtggatggcgataacgcggcagccatg
cgctataccgaaatccgcatgtcgcgcatcgcccatgaactactggcggatctcgacaag
gaaacagtggatttcggtccgaattacgacggctcggaaaaagagccactgattctgccc
gcgaaaattcccaatctgctcattaacggctcttccggcatcgcggtaggcatggcgacc
aacattccgccacataatctgaacgaagtggtggaagcttgcctcgccctgctgaaaaac
cctgaaaccaccatcgaagaattgatcgagatcataccagcgcccgattttccaaccgcc
ggcatcatctacggcgtcgccggcgtgagagaaggttaccaaacggggcgcggccgggtc
gtgatgcgcgcgcgcactcacttcgaggacatggaaaagggcagccgccagagcatcatc
attgatgagttgccgtatcaggtgaacaaggccaatttgctgatccgtatcggcgaactg
gtgcgcgacaagaaaatcgaaggtatttccgatctgcgtgacgaatcggataaatccggc
atgcgcgtggtaatcgagctccgtcgcggagaagtgcctgaagtggtgctgaacaacctg
tataaagaaacacaaatgcaggacactttcggcatgaacatggtggccttgctggatggg
cagcccaggctgctgaatctgaagcagatgctggatgcgttcttgcgccatcgccgcgag
gtggtgacaagacgcacggtgtttgaattgaagaaggcacgtgaacgcggccatctgctg
gaaggcctggcggtggcactctccaacgtggatgaggtgatcgcgctgatcaaggctgcc
ccgactcctgcggtggcgaaagaagcattgatgtcgaaactttggcgttccggattggtt
gaggaaatgctcgcccgtgcctcggttgacacgaaggcgttccgtcccgatggcctggcg
cctgaattcggcttatccagggatggatatcgcctctccgacgctcaggcgcaagcaata
ctggagctgcgcctgcaacgtctgacggggctggagcaggacaagatcgtcaatgagtac
aaggaggtcatggagcggatcgctgatttcctcgacattctctccaagcctgaacgtatc
acggccatcatcaccgaagagcttgttgccatgaagcaacagtttggtgacaagcgccgc
agtgaaatcgtcatcaatactcaggatttgagtatggaagacctgatcgcatcggcggac
gtggtcgtgacgctgtcgcatagcggctacatcaagtcgcaaccgctcgatgactaccgc
gcgcaaaaacgcggggggcgtggaaaacaggcaaccggcaccaaagaagacgacttcatc
gacaatctgttcatcgccaacactcacgattatatcctgtgcttttccagccgcggacga
gtgtactggatcaaggtttacgcggtgccgcagggcggacgcgcgtcgcgcggcaagccc
atcgtcaatctggtgcaactggaggaaggcgagaaaatcaatgctatccttccggtaaag
gagttcgacgagaatcgctatatattcatggcgacctccttcggcacggtgaagaaaacg
ccattgtcggaattctcccgtcctcgcgccagcggcatcatcgcggtcggcctggatgag
gacgattatctgatcggtgttgcgctgactgaaggcaagcatgatgtcatgctgttttca
gatggcgggaaagcggtgcgtttcgatgagaatgacgtgcgcgcaatggggcgcggcgca
cgtggcgtgcgcgggatgaaactgggcaagggacagaaagttatctccctgctggtcgcc
gaaagtgaagagcaggcagtcctgaccgcaacggaaaatggctatggcaaacgcacgccg
ataagcgaatatacccgccatggccgtggcagccagggcatgattgcgatcaagaccagc
cagcgtaatggcaaggttgtggcggcaagactggtaaggcaggatgacgaaatcatgctg
atcaccaccggcggcgtgctgatccgcacgcgcgtcaaggaagttcgcgaaatgagccgt
gccacccagggagtgacactgatcaacctcgatgacggggagaaactggccggactggag
agggtggttgagactgatgaggataacggggtaatcctataa
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