Nomascus leucogenys (northern white-cheeked gibbon): 100579279
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Entry
100579279 CDS
T03265
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03018
RNA degradation
nle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100579279 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
100579279 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100579279 (LSM5)
03041 Spliceosome [BR:
nle03041
]
100579279 (LSM5)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100579279 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
100579279 (LSM5)
Spliceosome [BR:
nle03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100579279 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
100579279
NCBI-ProteinID:
XP_003270553
Ensembl:
ENSNLEG00000015268
UniProt:
G1RZ54
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All DBs
Position
17:72660757..72669481
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AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaacgctactaccaatccgtcgcagctgctgccgttagagcttgtggacaaa
tgtataggatcaagaattcacatcgtgatgaagagtgataaggaaattgttggtactctt
ctaggatttgatgactttgtcaatatggtactggaagatgtcactgagtttgaaatcaca
ccagaaggaagaaggattactaaattagatcagattttgctaaatggaaataatataaca
atgctggttcctggaggagaaggacctgaagtgtga
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