Nomascus leucogenys (northern white-cheeked gibbon): 100579392
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Entry
100579392 CDS
T03265
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100579392 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nle04990
]
100579392 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
nle04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
100579392 (SYNPO2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100579392
NCBI-ProteinID:
XP_003271361
Ensembl:
ENSNLEG00000008969
UniProt:
A0A2I3HU71
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Position
7b:complement(36772132..36982823)
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AA seq
1261 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGYVESTTLQI
RPATKTQCTEFFLAPVKTEVPLAENQRSGPDCASSLKEETGPIYQRAPQMPDSQRGCVAE
ELILREKVEAVQPGPVVELQLSLSQERHKGASGPLVALPGAEKSKSPDPDPNLSHDRIVR
INSIPTNEKADPFLRSSKIIQISSGRELRVIQETEAGDAGLPRVEVILDCSDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPLKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
VDEEEEGGKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSRLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQDAAQTDGLRTMTSYQRKE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFSGASETANIQRMVPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQAAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASALNVAGPFKGPQAAVASQNY
TPKPTVSTPTVNAAQPGAVGPSSELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQPSKTGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASSPVSASPVPVGIPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQESGRSLSLPGRSVPPTISTSPWVYQPTYSYSSKPTDGLEKANKRPTPWEAAAKSPL
GLVDDAFRPRNIQESIVANVVSAARRKVLPGPPEDWNERLSYIPQTQKAYMGSCGRQEYN
ATVNNNMSTNSQYGSQLPYAYYRQASRNDSEIMSMETRSDYCLPVADYNHNPHPRGWRRQ
T
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttccatgactggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgcaaagattcgaaatcagagc
aaagcctctgggtctgggctctgtgagggagatgaagtggtttccatcaatggcaaccct
tgtgcagatctcacctaccctgaagtcatcaagctcatggaaagcataacagactctctc
caaatgctcatcaaaagaccatccagtggaataagtgaggctttgatatctgaaaatgaa
aacaaaaacctcgagcatctcacacatgggggctatgtggaaagtaccaccctgcagatt
cgaccagccacaaagacccagtgcacagaattcttccttgcccctgtcaagactgaagtt
cccctagctgagaaccaaagaagtggtcccgattgtgcaagcagcttgaaagaagaaaca
ggcccgatctaccaaagggctccccaaatgcctgactcccaaagaggatgcgtggcagaa
gagctgatcttaagggagaaggtagaagcggtacagcctggccctgtggttgagctgcaa
ctgtccctttcacaggagagacataagggcgctagtggccctttagtggctctcccggga
gctgaaaaatctaagtctcctgacccagaccctaacttgtcacatgacaggattgtccgc
ataaattcgatccctactaatgagaaagcagaccctttcctgaggtccagcaagataatc
cagatctccagtggcagagagttgagagtgatccaggaaactgaagcaggagatgcggga
ctgccccgggtggaagtgatcctcgactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggagaagatccacgc
tcggaaaaggatcacagcagacctctcaagcaccgagcgcggcatgcacggctcaggagg
agtgaaagcctgtcagaaaaacaagtgaaggaagcaaaatctaaatgcaaaagcattgcc
cttcttctaacggatgctcccaaccccaactccaagggggtgttgatgtttaagaagcga
cgtcggagggcaaggaaatacaccctagttagctacggtactggcgagcttgagcgagag
gtggacgaggaggaagaaggtggcaaggaggatacatgtgaagtggcatttcttggtgca
agcgaatcagaggtggatgaagagttattgtctgacgttgacgacaacacacaagttgtg
aactttgactgggattctagactggtggacattgaaaagaaactgaacagaggggacaag
atggagatgttaccagacaccacaggcaagggagccctcatgtttgccaagaggagggag
agaatggatcagatcacagcccaaaaagaagaggacaaggtaggtggaacgccaagcaga
gaacaagatgctgcccagaccgatggcctgagaaccatgacttcttaccaaagaaaggag
gaagagtcggtgagaacgcagagctctgtgagcaaaagctacatcgaggtgagtcatggt
cttggccatgttccccaacagaatggcttcagtggggcatctgagacagcaaacatccag
aggatggtccccatgaatagaacggccaaacccttcccagggtctgtgaatcagccagct
acccccttctcgccaacccgaaacatgacgagtcccattgctgactttcctgcacctcca
ccttactctgcagtcactcctccccctgacgctttctccagaggggtatcaagtccgatt
gctggcccagcacagccccctccatggccccaggctgccccgtggtcccagccagccttt
tacgattcatctgagcgaatagcttcccgagatgagaggatctcagtgccagcaaaaaga
acaggaatattacaggaggccaaaaggagaagcacgacaaaacccatgtttacttttaaa
gagcccaaagtaagcccaaatcctgaactcttgtcactccttcaaaattcagaaggcaaa
cggggcactggagctggaggtgattccggaccggaagaagactacctcagcttgggggca
gaggcttgtaatttcatgcaaagctcctctgccaaacaaaagacccctcctcctgttgct
ccaaaacctgcagtcaagtcctcatcctcccaaccagtaactccagtttccccagtctgg
tctccaggagtggctcccacccaacctcctgccttccccacatccaacccatcaaagggc
accgttgtctcctccatcaaaatagcccagccttcttaccctcctgcccggcctgcaagt
gctttgaacgtggctggtcccttcaaaggaccacaagcagcagtagccagtcagaattac
acacccaaaccaacagtttccacaccaacagtcaatgctgctcagcctggtgcagtggga
ccatccagtgagcttccaggaatgagtgggagaggagctcagctctttgctaaaaggcag
tcgagaatggagaagtatgtggtcgattcagacacggtgcaggcccacgctgctcgagct
cagtctcccactccatctctccccgccagttggaagtactcctccaatgtccgagcacct
cctcccgtggcctataatcctatccactcgccgtcttacccactggctgctctcaagtct
cagccatcggccgcacagccctccaaaacgggcaagaaaaaggggaagaaacccctcaat
gcattagatgtcatgaagcaccaaccatatcagctcaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcccccagaagtcatcagtcaaggtcaattcagccctg
gccatgaagcaagctcttcctccccggccagtgaatgctgcctcacctacgaatgtgcag
gcttcgtcagtgtactcggtaccagcctatacctctcctccttccttctttgcagaggcc
tcctcaccagtcagtgcatccccagtgcctgtgggcattcccacctcgccaaagcaagaa
tcagcctcatcatcttattttgtggcaccaaggccaaagttctcggccaagaaaagtggt
gtcacaattcaggagagtgggcgctccctttctcttcccggaagatcagtcccacccacc
atttctacatctccttgggtataccagcctacttatagttactctagtaaaccaactgat
ggactagagaaagcaaacaagagaccaactccttgggaagcagcagcaaaatctcctctc
ggtctagtggatgatgctttcagacccagaaacatccaggagtccattgtggcaaatgtg
gtctcagcagctcggaggaaggtgcttccagggcctccagaggactggaatgaaagactg
tcctatattcctcaaacccagaaagcctatatgggctcatgtggaaggcaagagtataat
gccacagtcaataataatatgtccaccaactcccaatatggttcacagttgccatatgca
tattataggcaggcttcaagaaatgattccgaaatcatgtccatggaaaccaggtctgat
tactgtcttccagtagctgattacaaccacaacccacacccaaggggatggagacgccaa
acatga
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