Nomascus leucogenys (northern white-cheeked gibbon): 100579570
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Entry
100579570 CDS
T03265
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X4
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100579570 (TNRC6A)
03036 Chromosome and associated proteins [BR:
nle03036
]
100579570 (TNRC6A)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100579570 (TNRC6A)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100579570 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
TFIIA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100579570
NCBI-ProteinID:
XP_012361014
Ensembl:
ENSNLEG00000011851
LinkDB
All DBs
Position
2:complement(80384075..80570959)
Genome browser
AA seq
1942 aa
AA seq
DB search
MYHHSTSPSEGGLSSGPIMSISKQLGVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRA
TANNQQPQQQPQPQPPQQQQQQQQPQQQPQQQPPQPQPQQQPQQQPQALPRYPREVPPRF
RHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSALTNQQPQNNGEVQNSKNQSDINH
STSGSHYENPQRGPVSSTSDSSTNCKNAVVSDLSEKEAWPSVPGSDPELASECMDADSAS
SSESEKNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGFSHGAI
ISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLAL
KGPVGCGSSGINIQCSTIGQMPNNQSINSKVSGGSTHGTWGSLQETCESEVSGTQKVSFS
GQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSSNTGAWRVSTMNHPQMQAPSGMN
GTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSGPNGQANGDTVNATLMQPGVNGPMG
TNFQVNTNKGGGVWESGAANSQSTSWGSGNGANSGGSRRGWGTPAQNTGTNLPSVEWNKL
PSNQHSNDSANGNGKTFTNGWKSTEEEDQGSATSQTNEQSSVWAKTGGTVESDGSTESTG
RLEEKGTGESQSRDRRKVDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSP
RGERKTDNGTEAWGSSATQTFNSGACIDKTSPNSNDTSSVSGWGDPKPALRWGDSKGSNC
QGGWEDDSAATGMVKSNQWGNCKEEKAAWNDSQKNKQGWGDGQKSSQGWSVSASDNWGET
SRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPTPSQ
GWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPAK
EEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGNSRSDQQAQVH
QLLTPASAISNKEASSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASS
TSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQEL
NSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNISFSRDSPEE
NVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERNPYFDKD
GIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGVGNT
AAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAM
LNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRPQQDQQGRPLSVQQQMMQQSRQL
DPNLLVKQQTPPSQQQPLHQPVMKSFLDNVMPHTTPELQKGPSPINAFSNFPIGLNSNLN
VNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSS
TSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINN
LSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSK
LTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRIGGGWGN
SDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNAL
VRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPGWQSLGSSQS
RLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGI
SSPSPINAFLSVDHLGGGGESM
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatcactccacgtcaccttctgaaggtggattgagctctggccctatcatgtcc
atctctaaacagcttggtgtgccagaacagataaagcccagtgtaagccagcctcagcct
gccaactctaataacggcacttccacagcaaccagcactaataataatgccaagcgagct
acagccaacaatcagcagccacagcagcagccacagccgcagccaccgcagcagcagcaa
caacagcagcagccgcagcagcagccgcagcagcagccgccacagccgcagccacagcag
cagccacagcagcagccacaggccttgcctcggtatcctcgtgaagtacctccacgattt
cgccaccaggaacacaaacagcttctaaagaggggtcagcattttcctgttatagcagca
aaccttggatctgctgttaaagtgttaaacagccagtcagaaagcagtgctttaacaaat
caacagccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccac
agtacttcaggatcccattatgaaaatccccagcggggacctgtgtcttctacaagtgat
tctagcacaaactgtaagaatgctgttgtaagtgacttgtcggaaaaagaagcatggccc
tcagtccctggcagtgatccggagttggcttcagaatgtatggatgctgattctgcctcc
agttctgaatcagaaaaaaacatcactatcatggcttcagggaacacaggtggtgaaaaa
gatggccttcggaatagcactggacttggttcccaaaacaagtttgtagttggtagcagc
agcaataatgtgggccacggaagcagtactgggccatggggtttttcccatggagccata
ataagcacatgtcaggtctctgtggatgctcctgaaagcaaatctgaaagtagcaacaat
agaatgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcact
ttgaattcagctagcaaccatggtgcctggccagtattagagaacaatggacttgcccta
aaagggcctgtagggtgtggtagttctggcattaatattcagtgcagtactataggccag
atgcctaacaatcagagtattaactctaaagtgagtggtggttctacccatggtacctgg
ggaagccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagt
ggtcaacctcaaaatattaccactgaaatgactggaccaaataacactactaactttatg
acctctagtttaccaaactccggttcagtgcagaataatgagctgcctagtagtaataca
ggggcctggcgtgtgagcacaatgaatcatcctcagatgcaggctccatcaggtatgaat
ggcacttccctttctcaccttagcaatggagagtcaaaaagtggaggctcttatggtact
acatggggtgcctatggttctaattactctggagacaaatgttcaggccctaatggccaa
gctaatggtgacactgtgaatgcaactctaatgcagcctggcgtaaatggtcctatgggc
actaactttcaagttaacacaaacaaaggaggtggtgtgtgggaatctggtgcagcaaac
tcccagagtacatcatggggaagtggaaatggcgcaaattctggaggaagtcgaagagga
tggggaacccctgcacaaaacactggcactaatttacccagcgttgagtggaacaaactg
cctagcaatcagcattccaatgacagtgcaaatggcaatggtaagacgtttacaaatgga
tggaaatctactgaggaagaggatcagggttctgccacatctcagacaaatgagcaaagc
agtgtgtgggccaaaacaggaggtacagtagagagcgatggtagtacagaaagcactgga
cgccttgaggaaaaaggaactggggaaagtcagagtagagacagaagaaaagttgatcag
cacacgttactccaaagcattgtaaacagaactgacttagatccacgtgtcctgtccaac
tctggttggggacagactcctattaagcagaatactgcctgggatacagaaacatcacct
agaggggaacgaaagactgacaatgggacagaggcctggggaagctctgcaacacagact
tttaactcaggggcatgtatagataagactagccctaatagtaatgatacctcatctgta
tcagggtggggcgatcccaaacctgctctgaggtggggagattccaaaggctcaaactgc
cagggagggtgggaagatgattctgctgctacaggaatggtcaagagcaatcagtggggg
aattgcaaagaggagaaggctgcatggaatgactcgcaaaagaacaaacagggatggggt
gatggacaaaaatcaagccaagggtggtctgtttctgccagtgataactggggagaaact
tcaaggagtaaccattggggtgaggccaataagaaatccagctcaggaggtagtgatagt
gacaggtccgtttccggttggaacgaacttggtaaaactagttcttttacttggggaaac
aacataaatccaaataattcatcaggatgggatgaatcttctaaacctactccttcccag
ggatggggagaccctccaaagtctaatcagtctctaggttggggagattcgtcaaagccg
gtcagttctccagactggaacaagcaacaagacattgttggatcttggggaatcccacca
gctacaggcaaacctcctggtacaggctggctggggggacctataccagccccagcaaaa
gaagaagaacccacaggctgggaggaaccatccccagaatctatacgtcgcaaaatggag
attgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaatgtgaac
atgtggaacaaaaacgtcccaaatggcaacagccgttcagaccagcaagcacaggtacat
cagctgctaacgcctgcaagtgccatctcaaacaaagaggcaagcagtggctctggctgg
ggtgagccctggggggagccttctactccagccacaactgtggataatggtacttcagca
tggggtaagcccatagacagtggtcccagctggggggaacccattgctgcggcatccagc
acatccacgtggggctccagctctgttggtccacaagcattaagcaaatctgggccaaaa
tctatgcaagatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggc
tgggaagaggaagaggatgtagagattggaatgtggaatagtaattcatctcaagagctt
aactcatctttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggc
aaaaaaaggagaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaagcgtgg
ataaatccatttgttaaacagttttcaaatatcagtttttcgagagactcaccagaggaa
aatgtacaaagcaataagatggacctttctggaggaatgttacaagacaaacgaatggag
atagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggt
tctcggcctcagatttccaaagagtcttccatggagcgcaatccttattttgataaggat
ggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagctt
cccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctgggtatg
caaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaacaca
gcagcacaaccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcct
aatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctg
aagtatgcaccaaacaacggtggcctgaatccactctttggccctcaacaggtagccatg
ctgaaccagctatcccagctaaaccagctttctcagatctcccagttacagcgattgtta
gcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggccgcagcaa
gaccagcagggtcgacctcttagcgtgcagcagcaaatgatgcaacaatctcgtcaactt
gatccaaacctgttggtgaagcagcagactccaccatctcagcagcagccactccatcag
ccagtcatgaagtctttccttgacaatgtcatgccccacactacacctgagctgcaaaaa
gggccatcaccaataaatgctttcagcaacttccctataggcttgaactcaaacttgaat
gtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaaatggacgaca
gtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatt
tcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagcagt
acttcaccagccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcct
aacggctctagcagtgttaattggccaccagaatttcgtcctggtgagccatggaaaggt
tatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaat
ctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcc
tcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaac
tacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaa
ttgacatggtctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtc
cctttgccacctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcag
aagccacccttgtctacgtgggataattctccccttcgtataggtggaggatggggaaat
tctgacgccagatataccccaggttccagctggggtgagagcagctcagggagaataaca
aattggcttgttctaaaaaaccttacacctcagatcgatggctcaactctgcgcactctg
tgcatgcagcacggcccgctgatcacattccacctgaacctccctcacggaaatgctctg
gtccgctacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgta
ctggggaacactactattcttgctgagtttgccagtgaagaggagatcagtcgtttcttt
gcacaaagccagtctctgaccccttctcccggctggcagtctctcgggtccagccagagc
cggctgggctccctcgactgttcccactcattctccagccggaccgatctcaatcactgg
aatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttcactctggggg
accccgcattattccacaagcctgtggggtcctccaagcagcagcgacccccgaggaatt
agcagcccatctcccattaacgcttttctttctgttgaccacctgggtgggggtggagag
tccatgtaa
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