Nomascus leucogenys (northern white-cheeked gibbon): 100580613
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Entry
100580613 CDS
T03265
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X2
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nle04121
]
100580613 (PDZRN3)
Enzymes [BR:
nle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100580613 (PDZRN3)
Ubiquitin system [BR:
nle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100580613 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100580613
NCBI-ProteinID:
XP_012357681
Ensembl:
ENSNLEG00000002833
LinkDB
All DBs
Position
21:66773905..67016629
Genome browser
AA seq
723 aa
AA seq
DB search
MFTPPSESQLVDTGTQTDITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYI
GDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGR
IREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDL
HMDMLEEQHHQAMQFTASVLQQKKHDEDGGTTDTATILSNQHEKDSGVGRTDESTRNDES
SEQENNGDDATASSNPLAGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDEC
ERFRELLELKCQVKSATPYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIV
RAHKMQQLKEQYRESWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGES
CRSTPLTLEISPDNSLRRAAEGISCPSSEGAVGTTEAYGPASKNLLSITEDPEVGTPTYS
PSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSY
MQLIQQKSAVEYAQSQMSLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLL
RERALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCL
KEQQAADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSV
TTV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgcctccatcagagtcgcagctggtggacacgggaacccaaaccgacatcacc
tttgaacatatcatggccctcactaagatgtcctctcccagcccacccgtgctggatccc
tatctcttgccagaggagcatccctcagcccatgaatactacgatccaaatgactacatt
ggagacatccatcaggagatggacagggaggagctggagctggaggaagtggacctctac
agaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggacgacgaagac
gacattgggatttatatcagtgagattgaccctaacagcattgcagccaaggatgggcgc
atccgagaaggagaccgcattatccagattaatgggatagaggtgcagaaccgtgaagag
gctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgattgcaaggcct
gaactccagctggatgagggctggatggacgatgacaggaacgactttctggatgacctg
cacatggacatgctggaggagcagcaccaccaggccatgcaattcacagctagcgtgctt
cagcagaagaagcacgacgaagacggtgggaccacagatacagccaccatcttgtccaac
cagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgcaatgacgagagc
tcggagcaagagaacaacggcgacgacgccaccgcatcctccaacccgctggcggggcag
aggaagctcacctgcagccaggacaccttgggcagcggcgacctgcccttcagcaacgag
tccttcatttcggccgactgcacggacgccgactacctggggatcccggtggacgagtgc
gagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccaccccttacggc
ctgtactaccctagcggccccctggacgccggcaagagtgaccctgagagcgtggacaag
gagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctgagcatcgtg
cgcgcccacaagatgcagcagctcaaggagcagtatcgcgagtcctggatgctgcacaac
agcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctctcagacatc
accgagctcccggagaaatccgacaaggacagctcgagcgcctacaacacaggcgagagc
tgccgcagcaccccgctcaccctggagatctcccccgacaactccttgaggagagcggcg
gagggcatcagctgcccgagcagcgaaggggctgtggggaccacggaagcctacgggcca
gcttccaagaatctgctctccatcacagaagatcccgaagtgggcacccctacctatagc
ccgtccctgaaggagctggaccccaaccagcccctggaaagcaaagagcggagagccagc
gacgggagccggagccccacgcccagccaaaagctgggcagcgcctacctgccatcctac
caccactccccatacaagcacgcgcacatcccggcgcatgcccagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcaaagccagatgagcctggtg
agcatgtgcaaggacctgagctctcccaccccgtcggagccgcgcatggagtggaaggtg
aagatccgcagtgacgggacacgctacatcaccaagaggcccgtgcgggaccgcctgctg
cgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgacgacgacgcg
gtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcagcacctggtg
aaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttggattgtctc
aaggagcagcaagcagccgacgacaggaaggagatgaacattctcgaactgagccacaaa
aagatgatgaagaagaggaataaaaaaatcttcgacaactggatgacaatccaagaactc
ttaacccacggcacaaaatccccggacggcactagagtatacaattccttcctatcggtg
actactgtataa
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integrated database retrieval system
