Nomascus leucogenys (northern white-cheeked gibbon): 100581153
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Entry
100581153 CDS
T03265
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nle03036
]
100581153 (SHOC1)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100581153 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
100581153
NCBI-ProteinID:
XP_003264047
Ensembl:
ENSNLEG00000016401
UniProt:
G1S357
LinkDB
All DBs
Position
8:complement(87728152..87825117)
Genome browser
AA seq
1444 aa
AA seq
DB search
MTDTSVLDQWKASFSVEDFLEKKTITRMVTQINCEFEEVVPSSNPDSQIEVEEVSLYTHM
DYNEVFTPVSCLEKCSALQNQNQDLFIDDKGILFVSNRKHLPTLPTLLSRLKLFLVKDPL
LDFKGQIFTEANFSRECFSLQETLEAFAKEDFCMDKVNFCQEKLEDTICLNEPSSFLIEY
EFLIPPSLKPEIDIPSLSELKELLNLVPEIINYADENEKLFEKDLTNKHGIEDIGDIKFS
STEILTIQSQSEPEECSKPGELEMPLTPLFLTCQHSSVNSLCTELQTFPLSPVCKINLLT
AEESANKYYMMWQLERCRSPLNPFLLTVPRLQEPHRQYSVTDLKKIFSVKEESLVINPEK
AEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFLPTEVLQLESCLEHKSHSSPI
ALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDDFSDKRAAKEEKPKNDQESVNRIIQKK
ENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDPLSDFIMLRNKYKTCTSKTEV
TNSDEKHDKEACSLTLQEESPIVHINKTLEEINQERGTDNVIEIQASDSQCQAFCLLEAA
ASPILKNLVSFCILPTANWKFATVIFDQTRFLLKEQEKVVSDAVHQGTIDEREMTFRHAA
VLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKKPETN
YKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSNERKGF
LESEGVLKGTSSCVVVHNQYIGADFPWSKFSFVVEYNYVEDSCWTKHCKELNIPYTAFKV
ILPDTVLERSTLLDRFGGFLLEIRIPYVFFASEGLLNTPDILQLLESNYNISLVERGCSE
SLKLFGSSERYVVVTIDEQTAIILQDLEELNCEKASDNIIMRLMALSLQYRYCWIILYTK
ETLNSEYPLTEKTLHHLALIYAASVSFGLNSEELDVKLIIAPGVEATALIIRQIADHNLM
TSKRDPHEWLDKSWLKISPSEEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQE
LLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENRNQISTLSSQSSASDLDSVIQ
EHNEYYQYLGLGETVQEDKTTTSNDNYSIMELKEISSFLPSVSSYNQTSYWKDSSCKPNI
GQNTPFLINTESRRPAYNCFLNHSDSELDVFSLGLTQMNCETIKSPTDTQKRVSVVPRFI
NSQKRRTHEAKGFINKDVSDPIFSLEGTQSPLLWNFKKNIWEQENHPFNLQYGAEQTTCN
KLYSQKGNLFTDQQKCLSDESEDLTCESSNDETFWRELPSVPSLNLFHASDSNANPKEFN
SLYFYQRAGKSLGQKRQPESSFNSGDKESLTGFIYSQLPQFKKRRLAYEKVPGRVDGQTR
LRFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacctcagtcttggaccaatggaaagcaagtttctctgtggaggatttcctt
gagaaaaaaacaattacaagaatggtgacccagattaattgtgaatttgaggaagttgtt
ccaagttcaaatccagactcccaaattgaagtagaggaggtcagtttatacacccacatg
gactacaatgaagtctttacccctgtcagttgtttagaaaaatgttcagcacttcaaaac
cagaaccaagatttatttattgatgataaaggaatactttttgtaagtaatagaaaacac
ctaccaactttgcctactctcttgagtagactaaaactgtttttggtaaaggatcctctt
ttggatttcaaaggacagatcttcacagaagctaatttttccagggaatgtttctctctt
caagaaactttggaagcttttgcgaaagaagatttttgtatggataaagtgaacttttgt
caagagaaactagaagatacaatatgtttaaatgagccgtcaagttttcttattgagtat
gaattcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaactg
aaggagttattaaacctagtgccagaaataataaactatgcagatgaaaatgaaaagctt
tttgaaaaagatcttactaacaagcatggaattgaggatatcggggatataaaattcagc
tccacagagattttgaccattcaaagccagagtgaaccagaagagtgcagtaaaccagga
gagttagaaatgccactaactcctctattcctaacatgccaacattcttcagtgaattca
ttatgtacagaacttcagacatttccattatctccggtttgtaaaattaatttgcttact
gctgaagaatcagctaataaatactacatgatgtggcaattagaaagatgtagaagccct
ttgaacccatttttgcttacagtgccaagacttcaagagccccaccgccaatattcagtt
acagatttgaaaaagatattttctgttaaagaagaaagtcttgtgattaatccagaaaag
gcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaacattggaacatctg
aatacatatttatgtcatgataatttgtcttctaatgacactaaaattgagatatttttg
cctacagaagtgcttcaattagaatcatgtctagaacataaaagtcattcttcacctatt
gcacttattgatgaaaaatctacaaatgctcatttatcacttccacaaaagagtccatct
ctggcaaaagaagtaccagatctatgtttttctgatgacgatttctctgataaaagagca
gcaaaagaagaaaaaccaaagaatgaccaagaatcagtaaacagaataatccaaaagaaa
gaaaataacgatcactttgaacttgactgtacaggaccatctattaaatcaccttcctct
tcaataattaaaaaagcatcttttgaacatggtaaaaaacaagagaatgatttggaccct
ttgagtgactttattatgctgcgaaataaatataagacttgtacctcaaagactgaagtc
acaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaagaagaaagt
cctattgttcatattaataaaaccctggaggaaataaatcaggaaaggggaacagataat
gtcattgaaattcaagcatcagatagccagtgccaagcattttgcctcctcgaagcagca
gcttctcctatcttaaaaaaccttgtatccttctgtattctcccaactgctaattggaaa
tttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaaaaagtagta
agtgatgctgttcaccaaggtacaattgatgaaagagaaatgactttcaggcatgccgct
gtcttacatcttctggtaacaattagagatgtccttttaacatgcagcttggacacagca
ttgggatatttgtcaaaggcaaaggatatctacaatagcattttaggcccctatttgggt
gacatttggagacagctggagattgtacagtttattagggggaaaaagcctgaaaccaac
tacaagatacaagaattgcaatgtcagatactaagttggatgcaaagtcaacagcaaatt
aaggtactgattataataagaatggactcagatggtgaaaaacatttgctcattaaaatt
cttaacaaaatagaaggtttaacactgactgtccttcattcaaatgaaagaaaaggtttt
ctggaatctgaaggtgttttaaagggtacaagttcctgtgtagttgtacataatcaatat
attggagcagatttcccatggagtaagttctcatttgtggtggaatacaattatgtggaa
gactcttgttggactaaacactgcaaagagttgaatattccttacacggcctttaaagtg
attcttccagacacagttttagaaagaagcaccttgctggatagatttggaggttttctt
ttggaaattcggattccatatgtgttttttgcatctgaaggacttcttaatactccagac
atacttcagctgctagaatccaactataacatctcactagtagagagaggctgcagtgag
tcattgaaactctttggaagttcagagcgttatgtagtggtgacaattgatgaacaaact
gccataattttgcaggatctagaagaattgaactgtgagaaggcatcagacaatatcatt
atgaggctgatggcattatcattacagtacagatattgttggataattttatataccaaa
gaaacattaaattcagagtatccacttacagaaaagacacttcatcacctagcactgatt
tatgcagcttcggtttcatttgggctaaactctgaagaactggatgtaaagcttataatt
gccccaggagtagaagcaactgccttgataattcgacaaattgctgaccacaatttaatg
acctcaaagagagatcctcatgaatggctggataaatcctggcttaaaatttcaccatct
gaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcagcttatg
ctaaataaaggaccttcactgcattggatattattagcaactctgtgtcaacttcaggaa
ctcttacctgaagtcccagaaaaagtgttaaagcatttttgtagcatcacttccctattc
aagattagttcttcttccataacaaaatcaccgcaaatttcctcacctcaggaaaatagg
aatcagattagtaccttgtcttctcagagttcagcttctgatttagactctgtcattcaa
gaacataatgaatattatcagtatttaggattaggagagacagtgcaggaagacaaaacc
accacttcgaatgacaactattctattatggaactaaaagaaatctcaagttttttacca
tctgtgtcttcatacaatcagaccagctactggaaagactccagctgtaaacctaatatc
gggcagaatactccttttctaattaatacagaatcaaggagaccggcttataactgcttt
ctaaaccacagtgattcggagttagatgtcttttctttgggtctaacacaaatgaactgt
gaaactataaaatcaccaactgacactcagaagagagtgtcagttgttccccgttttata
aattctcagaaaaggagaacacatgaagcaaaaggtttcataaataaagacgtatcggac
cctatcttttcactagagggcactcaatctcctcttctttggaactttaagaaaaatata
tgggaacaagagaatcacccgttcaacttacaatatggtgcagagcagactacatgtaac
aaattgtactctcagaaaggtaatttattcactgatcagcaaaaatgtctatcagatgag
tctgaagacctcacatgtgaaagttcaaatgatgagactttctggagagaattaccatct
gtccccagtttgaatttatttcatgcttctgattctaatgcaaatccaaaagaattcaac
agcctttacttctaccaaagagctggaaaaagtttaggacagaaaaggcaacctgaatct
tcatttaactcaggagacaaggaatcattaacaggttttatatactcacaactaccacaa
ttcaaaaaacgacgtctagcatatgaaaaagtccctggtagagttgatgggcagactcgg
ctgaggtttttttga
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