Nomascus leucogenys (northern white-cheeked gibbon): 100581667
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Entry
100581667 CDS
T03265
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04151
PI3K-Akt signaling pathway
nle04510
Focal adhesion
nle04512
ECM-receptor interaction
nle05165
Human papillomavirus infection
nle05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100581667 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100581667 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100581667 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100581667 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100581667 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100581667 (TNR)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100581667 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
EGF_2
Pur_ac_phosph_N
Uroplakin_II
Motif
Other DBs
NCBI-GeneID:
100581667
NCBI-ProteinID:
XP_003258973
Ensembl:
ENSNLEG00000015398
LinkDB
All DBs
Position
12:26004824..26447977
Genome browser
AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNMLIGVNLILLGSMIKPSECQLEVTTERVQRQSVEEEGGIANYNTSSKE
QPVVFNHVYNINVPLDSLCSLGLEASAEQEVSAEDDTLAEYTGQTSDRESQVTFTHRINL
PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCNANCCQESAATGQLDYIPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNA
CSGRGQCEEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQVPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFILLKYGL
VGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPKGIGPTTRATLTDLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLFWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGSEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLI
ATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGVSEEFRLVDLLPSTHYTAT
MYATNGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLLENTHYTVLLQAAQDTAWSSITSTAFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDSRNLYKLRIGSY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLMAGRKRQSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagatggggaaacagtggttctgaagaacatgctcattggcgtcaacctgatc
cttctgggctccatgatcaagccttcagagtgtcagctggaggtcaccacagaaagggtc
cagagacagtcagtggaggaggagggaggcattgctaactacaacacatccagcaaagag
cagcctgtggtcttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctcc
ttggggctagaggcctctgctgagcaggaggtgagtgcagaagatgacactctggcagag
tacacgggccagacctcagaccgcgagagccaggtcacctttacacacaggatcaacctc
cccaaaaaggcctgcccatgtgccagttcagcccaggtgctgcaggagctgctgagccgg
atcgagatgctggagagggaggtgtcggtgctgcgagaccagtgcaacgccaactgctgc
caagaaagtgctgccacaggacaactggactatatccctcactgcagtggccacggcaac
tttagctttgagtcctgtggctgcatctgcaacgaaggctggtttggcaagaattgctcg
gagccctactgcccgctgggttgctccagccggggggtgtgtgtggatggccagtgcatc
tgtgacagcgagtacagcggggatgactgttccgaactccggtgcccaacagactgcagc
tcccgggggctctgcgtggacggggagtgtgtctgtgaagagccttacactggcgaggac
tgcagggaactgaggtgccctggggactgttcggggaaggggagatgtgccaacggtacc
tgtttatgcgaggagggctacgttggtgaggactgcggccagcggcagtgtctgaatgcc
tgcagtgggcgaggacaatgtgaggaggggctctgcgtctgtgaagagggctaccagggc
cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccactcctcaaggg
ctacaatttaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctcgttt
tccttcgatgggtgggaaatcagcttcattccaaagaacaatgaagggggagtgattgct
caggtccccagcgatgttacgtcctttaaccagacgggactaaagcctggggaggaatac
attgtcaatgtagtggctctgaaagaacaggcccgcagcccccctacctcggccagcgtc
tctacagtcattgacggccccacgcagatcctggttcgagatgtctctgacaccgtggct
tttgtggagtggattccccctcgagccaaagtcgatttcattctcttgaaatatggcctg
gtgggcggggaaggtgggaggaccaccttccggctgcagcctcccctgagccaatactca
gtgcaggccctgcggcctggctcccgctacgaggtgtcagtcagtgccgtccgagggacc
aacgagagcgattctgccaccactcagttcacaacagagatcgatgcccccaagaacttg
cgagttggttctcgcacagcaaccagccttgacctcgagtgggataacagtgaggccgaa
gttcaggagtacaaggttgtgtacagcaccctggcgggtgagcaatatcatgaggtactg
gtccccaagggcattggtccaaccaccagggccaccctgacagatctggtacctggcact
gagtatggagttggaatatctgccgtcatgaactcacagcaaagcgtgccagccaccatg
aatgccaggactgaacttgacagtccccgagacctcatggtgacagcctcctcggagacc
tccatctccctcttctggaccaaggccagtggccccattgaccactaccgaattaccttt
accccatcctctgggattgcctcagaagtcactgtacccaaggacaggacctcgtacaca
ctaacagatctagagcctgggtcagagtacatcatttccatcactgctgagaggggtcgg
cagcagagcttggagtccactgtggatgctttcacaggcttccgtcccatctctcatctg
cacttttctcacgtgacctcctccagtgtgaacatcacttggagtgatccatctccccca
gcagacagactcattctgaactacagccccagggatgaggaggaagagatgatggaggtc
tccctggatgccaccaagaggcatgctgtcctgatgggcctgcaaccagccacagaatat
attgtgaaccttgtggctgtccatggcacagtgacctctgagcccattgtgggctccatc
accacaggaattgatcccccaaaagacatcacaattagcaatgtgaccaaggactcagtg
atggtctcctggagccctcctgttgcatctttcgattactaccgagtatcatatcgaccc
acccaagtgggacgactagacagctcagtggtgcccaacactgtgacagaattcaccatc
accagactgtacccagctaccgaatacgaaatcagcctcaacagcgtgcggggcagggag
gaaagcgagcgcatctgtactcttgtgcacacagccatggacaaccctgtggatctgatt
gctaccaatatcactccaacagaagccctgctgcagtggaaggcgccagtgggtgaggtg
gagaactacgtcattgtccttacacactttgcagtcgctggagagaccatcctggttgac
ggagtcagtgaggaatttcggcttgttgacctgcttcctagcacccactatactgccacc
atgtatgccaccaatgggcctctcaccagtggcaccatcagcaccaacttttctactctc
ctggaccctccggcaaacctgacagccagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagattgaaaattatgtcttgacttacaaatccaccgatgga
agccgcaaggagctgattgtggatgcagaagacacctggattcgactggagggcctgttg
gagaacacacactacacggtgctcctgcaggcagcacaggacaccgcgtggagcagcatc
acctccaccgccttcaccacagggggccgggtgttccctcatccccaagactgtgcccag
catttgatgaatggagacactttgagtggggtttaccccatcttcctcaatggggagctg
agccagaaattacaagtgtactgcgatatgaccaccgacgggggaggctggattgtattc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgattaccgtgttggc
ttcgggaacctggaagatgagttctggctggggctggacaacatacacaggatcacatcc
cagggccgctatgagctgcgcgtggacatgcgggatggccaggaggccgccttcgcctcc
tacgacaggttctctgttgaggacagcagaaacctgtacaaactccgcataggaagctac
aacggcactgcgggggactccctcagctatcatcaaggacgccctttctccacagaggat
agagacaatgatgttgcagtgactaactgtgccatgtcgtacaagggagcgtggtggtat
aagaactgccaccggaccaacctcaatgggaagtacggggagtccaggcacagtcagggc
atcaactggtaccattggaaaggccatgagttctccatcccctttgtggaaatgaagatg
cgcccctacagccaccgtctcatggcagggagaaaacggcagtccttacagttctga
DBGET
integrated database retrieval system
