Nomascus leucogenys (northern white-cheeked gibbon): 100582874
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Entry
100582874 CDS
T03265
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03008
Ribosome biogenesis in eukaryotes
nle03013
Nucleocytoplasmic transport
nle03015
mRNA surveillance pathway
nle05014
Amyotrophic lateral sclerosis
nle05164
Influenza A
nle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100582874 (NXF1)
03015 mRNA surveillance pathway
100582874 (NXF1)
03008 Ribosome biogenesis in eukaryotes
100582874 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100582874 (NXF1)
05168 Herpes simplex virus 1 infection
100582874 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100582874 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100582874 (NXF1)
03009 Ribosome biogenesis [BR:
nle03009
]
100582874 (NXF1)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100582874 (NXF1)
mRNA cycle factors
Stress granule specific factors
100582874 (NXF1)
Ribosome biogenesis [BR:
nle03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100582874 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
100582874
NCBI-ProteinID:
XP_012367950
LinkDB
All DBs
Position
4:complement(82366340..82387504)
Genome browser
AA seq
619 aa
AA seq
DB search
MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDGDVA
MSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWF
KITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKIL
DRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG
NELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI
PFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNAS
SEETQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTHLKAKGEIPEVAFMK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcgtacagcgaacacgatgatgagcgtgttaatttccctcaa
agaaagaagaaaggccggggtcccttccggtggaaatatggtgaaggaaaccgtaggtct
ggaagaggcggttctggtattcggtcttcccgccttgaggaagatgatggagatgtggca
atgagtgacgcccaggatggtccccgagtacgatacaacccctataccacccgacctaac
cgtcggggtgatacttggcatgatcgagatcgcattcatgttactgtgcggagagacaga
gctcctccagagagaggaggggctggcaccagccaggatgggacctcaaagaactggttc
aagattacaattccttatggcagaaagtatgacaaggcatggctcctgagcatgattcag
agcaagtgcagtgtgcccttcacccctattgagtttcactatgagaatacacgggcccag
ttcttcgttgaagacgccagtactgcctctgcattgaaggctgtcaactataagattttg
gatcgggagaaccgaaggatatctatcatcatcaactcttctgctccaccccacacgata
ctgaatgaactgaagccagaacaagtagaacagctaaagctgatcatgagcaaacgatat
gatggctcccaacaagcccttgacctcaagggcctccgttcagacccagatttggtggcc
cagaacattgatgttgtcctgaatcgcagaagctgtatggcagctaccctgaggatcatt
gaagagaacatccctgagctattgtccttgaacttgagcaacaacaggctatacaggctg
gatgacatgtctagcattgttcagaaggcgcccaacctgaagatcctaaacctttctgga
aatgaattgaagtctgagcgggaattggacaagataaaggggctgaagctagaagagctc
tggctcgacggaaactccctgtgtgacaccttccgagaccagtccacctacatcagcgcc
attcgcgaacgatttcccaagttattacgcctggatggtcatgagctacccccaccaatt
gcctttgatgttgaagcccccacgacgttaccgccctgcaagggaagctattttggaaca
gaaaacttgaagagtctggtcttgcacttcctgcaacagtactatgcaatttacgactct
ggagaccggcaagggctcctggatgcctaccatgatggggcctgctgttccctgagcatt
cctttcattcctcagaaccctgcccgaagcagcttggcggagtatttcaaggatagcaga
aatgtgaagaagcttaaagaccctaccttgcggttccggctgctgaagcacacgcgtctc
aacgttgttgccttcctcaatgagttgcccaaaacccagcacgacgtcaattccttcgtg
gtagacataagcgcccagacaagcacactgctgtgtttttctgtcaatggagtcttcaag
gaagtggatggaaagtctcgggattctttgcgagccttcacccggacattcattgctgtt
cctgctagcaattcagggctatgtattgtaaacgacgagctatttgtgcggaatgccagt
tctgaagagacccaaagagccttcgctatgcctgcacccacgccttcctccagcccggtg
cccaccctctctccagagcagcaggaaatgttgcaagcattctctacccagtctggcatg
aacctcgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcc
caggccttcactcatctcaaggccaagggcgagatcccagaagtggcattcatgaagtga
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