Nomascus leucogenys (northern white-cheeked gibbon): 100582970
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Entry
100582970 CDS
T03265
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100582970 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nle03041
]
100582970 (PRPF40B)
Spliceosome [BR:
nle03041
]
Complex A
U1 snRNP components
U1 related factors
100582970 (PRPF40B)
Complex B
100582970 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
100582970
NCBI-ProteinID:
XP_030672473
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Position
8:complement(2504751..2526708)
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AA seq
894 aa
AA seq
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MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
LPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEAVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVPTGLLE
PEPGGSEDCDVSEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNRE
KAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKE
EARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFF
LAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDK
EDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWM
ELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNT
AFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSML
RQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLEQTECQHLHTKGRK
HGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGA
ALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQ
DKDRELQQAEHPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccagggatccccccaccctttcctccg
atggggcttccccccatgagtcagagaccaccagctatcccccccatgccacctggcatc
ctgcccccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatg
gtacctccgatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccgggtgcggacaccgccagctctgctgtagctgggacaggccctccgagggccctatgg
agtgagcatgtggccccagatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctcctgtcccaatgtccc
tggaaagagtacaagtcggacacaggcaaaccttattactataacaaccagagtaaagag
tctcgctggacccggcccaaggatctggatgacctagaggcagttctagtcaaacaagag
gctgcagggaaacagcagcagcagctgccacagacacttcagccacagccacctcagcca
cagcctgaccccccacctgcacctcctggccccaccccagtgcccacaggcctcctggaa
cctgagccaggtgggagtgaagattgtgatgtgtcggaggccacccagcccctggaacag
gggttcctgcagcagctggaggagggccccagcagttctggacagcatcaaccacagcag
gaggaggaggaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggag
aaggcaaagcaggcattcaaggaactgctgagggacaaggctgtcccctccaatgcctca
tgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcctaaactg
agtgaaaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggag
gaagcccggctaagggccaaagaggccaagcagaccctgcagcatttcctggagcagcat
gaacgcatgacctccaccacccgctaccggcgggcagaacagacctttggggagctggag
gtctgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttc
ctggccaagaaggagaaggaacaggccaagcagctccggcgccgtaatatccaggcccta
aagagcatcctggatgggatgagtagtgtcaacttccaaaccacgtggtcccaggcccag
cagtacctcatggataaccccagctttgctcaggaccatcagctgcagaacatggacaag
gaagatgcactgatctgtttcgaggagcacatccgagctttggagagggaagaggaggag
gaacgggagcgggcccggcttcgggagcgacgccaacaacgcaagaatcgggaggccttc
cagaccttcctggacgagctgcatgagacagggcagctgcactctatgtccacctggatg
gagctatatccagcagtcagcactgatgtccgctttgccaacatgctgggccagccgggc
tccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgat
gaaaagaagatcattaaggatatccttaaggaccggggcttctgcgtggaggtgaacaca
gcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcactggacgca
ggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggaa
cgggagaaggaggaggcacgcaggatgcggcgcagggaagctgcctttcgaagcatgctg
aggcaggctgtgcctgctctggagctaggcactgcctgggaagaggtccgtgagcgtttt
gtgtgtgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttccgg
gagttcctacaggtgctggagcagactgaatgccagcacctccacaccaaaggccgaaag
catggcaggaaaggcaagaagcaccatcgcaagcgttcccactcaccctcaggctctgag
tcagaagaagaggagctgcccccaccatctctccggccccccaagcggaggaggcggaac
ccctcagagtcaggctctgagccctcttcctcacttgattcagttgaaagtgggggtgct
gcccttggaggacggggctccccttcctcccatcttcttggagcagatcatggccttcgg
aaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaatagtcctgag
agtgagacagaccctgaggagaaagctggcaaggagagcgatgagaaagaacaagaacag
gacaaggacagggagctgcagcaggcagagcatcctaaccgttccccaggctttggaatc
aagaaggagaagacaggctgggacacgtcagaaagtgagctgagtgagggtgagctggag
aggcggcggcggacactcctacagcagctggacgatcaccagtga
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