Nomascus leucogenys (northern white-cheeked gibbon): 100583223
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Entry
100583223 CDS
T03265
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100583223 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nle03041
]
100583223 (SNRNP40)
Spliceosome [BR:
nle03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100583223 (SNRNP40)
Complex C
U5 SnRNP specific factors
100583223 (SNRNP40)
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
WD40_like
WDR54
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100583223
NCBI-ProteinID:
XP_003276384
Ensembl:
ENSNLEG00000034156
UniProt:
A0A2I3GTM1
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Position
12:complement(557120..595186)
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AA seq
357 aa
AA seq
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MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI
AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagcagaagcgtaagggcccagagttgccgctggtcccagtcaagcggcag
cggcatgagttgctgttgggagcggggtcgggccccggagccgggcagcagcaggcgacg
ccgggagctttgctgcaagcgggacctccaaggtgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtatactgctgcaagttccaccctaacggatccacc
ttagcatctgcaggatttgaccgactgatattactgtggaatgtctatggtgactgtgat
aactatgccacactgaagggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgctcttctcagcatccacagataaaactgtggctgtgtgggatagcgaaaca
ggtgagagggttaaaaggctaaagggacatacttcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagttcgt
gtctgggatgtccggccatttgcccccaaagagaggtgtgtaaagatatttcaaggaaat
gtgcacaactttgaaaagaacctcctgagatgttcttggtcacctgatggaagcaaaata
gcagctggctcagccgacaggtttgtgtatgtgtgggataccacaagcaggagaatattg
tataagctgcccggccatgctggctccatcaatgaagttgctttccaccctgacgagccc
atcattatctcagcatcaagtgacaagagactgtatatgggagagattcagtga
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